Falco cherrug (Saker falcon): 102051545
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Entry
102051545 CDS
T02911
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fch03041
]
102051545 (YTHDC2)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102051545 (YTHDC2)
Spliceosome [BR:
fch03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102051545 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
R3H
RNA_hel_CTD
DEAD
AAA_19
Ank_2
WHD_HA2
nSTAND3
ATPase
Ank
Ank_4
AAA_22
PhoH
nSTAND_NTPase5
AAA_7
UvrD-helicase
AAA_30
SRP54
T2SSE
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
102051545
NCBI-ProteinID:
XP_027664563
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MEFPSSFTSTERAFVHRLCQSLGLISKSKGKGANRYLTVRKKDGSERTHAVMTCFLAPKT
KHSIWSLIQRFPVTNKERTELLPKTERGNAFAVESENREVSKTSGRLNNGIPQVPVKRGE
SEFDSLRQSLPVFEKQEEIVKIIKENKVVLVVGETGSGKTTQIPQFILDDCYKNGTPCRI
FCTQPRRLAAIAVAERVAAERREKIGQTVGYQIRLESRVSPKTLLTFCTNGILLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLIKLRDVLQNQTNLRLIISSAALDADLFIRYFGSC
PVIHIQGRPFEVKEMFLEDILRSTGYTSKEMVKYKKQKQQEEKQQSALTEWCSAQENNSK
MESRRQRSVPSATKDCNLLADGSDTVFNQLTEKDANCLDPWLIKEMDSCLSDIWLHKDID
SFAQVFHLILAENVSVDYRHSETSATPLMIASGRGFLSQVEQLISMGASIHCKSSNGWMA
LDWAKRFGQTEVIDLLESYSASVEFGNMDESSLVQTSGNDLSAEDRELLKAYHHSFDNEK
VDLDLIMHLLYNICHSCDVGAILIFLPGYDEIVSLKDRILFDDKRFADNAHRYQVFMLHS
NMQTLDQKKVLKSPPAGVRKIILSTNIAETSITVNDVVYVIDSGKMKEKSFDALSSVTML
KMVWISKASAIQRRGRAGRCKPGVCFRLFSRLRFQNMLEYQTPELLRMPLQELCLHTKLL
APVNCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLTDLPVEPHLGK
MVLCAVVLKCLDPILTIACSLAYRDPFVLPTLASQKRAAMLCRKRFAAGTFSDHMALLRA
FQAWQKARSGGWEKAFCEKNFLSEATMEIIIGMRTQLLGQLRASGFVRTRGGADIRDVNT
NSENWAVIKAALVAGMYPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIPPENGQ
AAAIRALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNALQELSSFRGD
SVSNDNSDSEIEDKTADLALLKLDEWLHLKLDPEAACLLFQLRQKWHNLFLRRMRAPSKP
WSQVDETTVRAIIAVLSTEEQSAGLQQPSGIGQRPRPMTSEELPLASTRGSTNSRKSSAD
TEFSDDSSNPEKVLMKSMPPAPHQLKKYKEKTSLRSKRTSDDRSDQSSAKSTDSSSYPSP
SASPSPVSVKGSKPPSPRPNMSVRYFIMKSSNLQNIDISQQKGIWSTMPNNEHKLNRAFW
ESSMVYLIFSVQGSGHFQGFARMASEIGCEKSQDWGSAGFGGVFKVEWIRKESIAFQFAH
HLLNPWNDNKKVQVSRDGQELEPQVGEQLLQLWDRTPLAGKSSTD
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcttcttttacaagtactgaaagagcatttgttcaccggctctgtcag
tccctcggactgatatctaaaagtaaaggaaaaggagcaaatcgatatctgactgtaagg
aagaaggatggatcagaacgaacacatgcagtaatgacttgtttcttggctcccaaaaca
aaacatagcatttggagtttaattcagagatttccagtcacaaataaagaacgaacagaa
cttctgccaaaaacagagcgaggaaatgcatttgctgttgaatctgaaaatagagaagtg
agcaagacaagcgggcgacttaacaacggtatccctcaggttccagtgaaaagaggggaa
tcagagtttgattccttaaggcaatcactaccagtttttgaaaaacaggaagaaattgtc
aaaataataaaggaaaataaagttgttttggttgtaggagagactggatcaggaaaaact
actcaaatccctcagttcattctggatgattgttacaaaaatggaactccctgccgtata
ttttgcactcagccaagacgtttggcagctattgctgtggctgaaagagtggcagcagaa
agaagagaaaagattggccagacagttggttatcagatccgattagaaagcagggtttct
ccaaagacgctgttaacattttgcacgaatggcatactacttcgcacgctaatggcagga
gacagcactctatcaactgtgacacatgttattgtggatgaagtgcatgagagggatagg
ttcagtgacttcttgttaataaaactaagagatgtgttgcaaaaccagactaatttaaga
ctaattatttctagtgctgctctagatgcagatctctttattagatattttggaagttgc
cccgtaatacacatacaaggaagaccttttgaagttaaagagatgtttttggaggatatt
ttaagaagcactgggtatacaagcaaagagatggtgaagtacaaaaaacagaagcagcaa
gaagaaaaacagcaaagtgctcttactgagtggtgttctgctcaagaaaataacagcaaa
atggaatctcggagacaaagatctgtcccaagtgcaactaaagactgtaatctgttggct
gatggtagtgacacagtatttaatcaactgactgaaaaagatgcgaattgccttgacccg
tggctaataaaagaaatggattcttgtctctctgacatctggttgcataaagatattgat
tcctttgctcaggtgttccatctcattttagctgaaaatgtcagcgttgattataggcac
agtgaaacaagtgctactccactgatgattgcttcagggagaggctttctgagtcaagtg
gaacaactgatcagcatgggagcaagtatccactgcaaatcatccaatggctggatggct
ttggactgggctaagcgctttggacagacagaggttattgacctgttggagtcctacagt
gcttcagtggaatttggaaatatggatgaaagttccctggtccaaacaagtggtaatgac
cttagtgcagaggacagagaactgttgaaagcttatcatcacagttttgacaatgaaaaa
gtggatctggacctgattatgcacttactttataacatctgtcatagttgtgatgtggga
gctattttaatattccttcctggatatgatgagatagttagcctgaaggaccgtattctt
tttgacgacaagagatttgctgataatgctcacagataccaagttttcatgcttcattca
aatatgcagactttggatcagaagaaggtgcttaaaagtccacctgctggcgtccgcaaa
ataattctttctactaatattgcagaaaccagcataacagtcaatgatgttgtatacgtt
attgactcaggcaagatgaaagagaagtcttttgatgcactgagttctgttacaatgcta
aaaatggtgtggatttcaaaagccagtgctatccagagaaggggcagggctggacgctgt
aagcctggagtctgttttcgtctcttcagcaggcttcgatttcagaatatgttggaatat
cagactccagaacttctaagaatgccacttcaggagctttgtttacacacaaaacttctg
gctcccgttaattgtccaattgttgactttcttatgaaagctcctgatcctccaccagct
ttaattgtgagaaacgctgtgcaaatgcttaagacaatagatgccatggacccttgggaa
gatcttactgaacttggttatcatctcactgatctaccagtggagccacaccttggtaaa
atggtgttgtgtgctgttgttttgaagtgcctggatcctattcttactattgcttgcagt
cttgcatatcgagacccttttgtcctacctacactggcctctcaaaagcgtgcagccatg
ctgtgtagaaaacgttttgctgcaggaacatttagtgaccatatggcgcttctcagggct
ttccaggcgtggcagaaggcgcgcagtggtggctgggagaaagccttctgtgaaaagaac
tttctgtctgaagccacgatggaaatcatcataggaatgagaacacagttgcttggccag
cttagagcctcaggttttgttagaaccagaggaggagccgatattagagatgttaatact
aactctgaaaactgggctgtaattaaagctgccttagtggctgggatgtatcccaatcta
gtgcatgtagacagagaaagcctggttttgactggaccaaaggagaagaaagtgcgattt
catcctacctctgttcttagtcaacctcagtataaaaagattcctccagaaaacgggcaa
gctgcagccattcgggcactccctacagactggcttatatatgatgaaatgacgagagct
cacaggatagctaatatcagatgctgttcagttgtaacacctgtcactgtgtcactcttc
tgtggaccagctagattaccaagtaatgctttgcaggaactttcatcctttcgaggggac
agtgtatctaatgataacagtgatagtgagatagaggacaaaactgctgatttggcacta
ctgaagctagatgaatggctgcatctcaaactggaccctgaagctgcttgtttgctgttc
caactcagacagaagtggcataacttatttctgcgtcgtatgcgagctccttctaaacca
tggtctcaagttgatgaaacaactgtaagagcaattatagctgttttaagtactgaagaa
cagtctgcaggtttgcagcagccttcaggtattggtcagagaccaaggcctatgacttct
gaagaacttcctttagcgtctacgagggggtcaaccaacagtagaaaaagctcagcagac
actgaattctctgatgactcctctaaccctgaaaaagttttaatgaaatctatgcctcct
gcacctcaccagctaaagaagtacaaagaaaaaacctctttgcgctccaaacgaacttca
gatgacagatcagatcaatcatcagcaaagtctacagatagcagtagctatcctagcccc
tctgctagtccttctccagtatctgtaaagggttccaaacctccttcaccaagaccaaat
atgtcagttcggtactttatcatgaaaagtagcaacttgcaaaacattgatatttctcaa
cagaagggtatatggtctactatgccaaataatgaacataaactaaatagagccttttgg
gagagcagcatggtttacttaatattttctgttcaagggtctggacactttcagggcttt
gctagaatggcttcagagatagggtgtgagaaaagtcaagactggggatctgctggtttt
ggaggtgtatttaaggtggagtggatccgaaaagaaagcattgcttttcagtttgcacac
catttgctcaacccttggaatgacaataagaaagtgcaagtaagcagggatggccaggag
ctggagccacaagttggagagcagttgctacagctttgggaccgtactcctttggcagga
aaaagctcaactgattga
DBGET
integrated database retrieval system
