Falco cherrug (Saker falcon): 102052156
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Entry
102052156 CDS
T02911
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102052156 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102052156 (COL3A1)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102052156 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
102052156
NCBI-ProteinID:
XP_027662892
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MMSFVQKVTLLILAVFQPSVILAQQDVIGCTHLGQVYADRDVWKPEPCQICVCDSGSVLC
DDIICDDQELDCPNPEIPFGECCPVCPQTTPQPTRVPGVTQGPKGDPGFFGVPGRNGSPG
PPGQPGSPGAPGPPGVCQSCPSISGGSFSPQYDSYDVKAGSVGIGYPPQPISGFPGPPGP
SGPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPAGPPGKDGEPGRPGRHGD
RGIPGIPGHKGHPGMPGVPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGAAGVPGQPGP
RGPTGERGRPGSPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGS
SGSPGERGEPGPQGHAGPPGPQGPPGRAGSPGGKGEMVSTFHIASPVTPCFLHLCLLFTP
GPPGTSGTPGAKGPPGEPGKNGAKGDPGPKGDRGENGTPGAPGPPGEEGKRGANGEPGQN
GIPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGIR
GLPGIPGSPGSDGKPGPPGSQGDSGRPGPPGPSGPRGQPGVMGFPGPKGNEGAPGKNGER
GPGGPPGTPGPAGKNGDVGLPGPPGPAGAPGERGEPGASGPPGLQGLPGGPGPAGENGKP
GEPGPKGDIGGPGFPGPKGENGIPGERGAQGAPGPPGARGGPGPAGSEGAKGPPGPPGPP
GGTGLPGLQGMPGERGASGSPGPKGDKGEPGGKGADGIPGARGERGNVGPIGPPGPAGPP
GDKGETGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEA
GPPGAAGPQGGPGAPGPPGPQGTKGERGSPGGPGAAGFPGARGLPGPPGSNGSPGPPGNA
GPAGKDGPPGPPGSTGGPGSPGPAGTRGEPGPPGEKGSPGARGERGAPGEPGPQGIVGGR
GSTGLPGLRGPSGPPGMAGAKGEDGKPGTNGIPGERGAPGPQGPIGQRGLPGEPGRDGNP
GSDGSPGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGSSGTPGKAGERGFQGPPGPPGST
GPAGTRGPVGPQGPRGDKGEPGERGSIGIKGHRGFPGTPGLPGPPGPLGPQGAIGSPGAS
GARGPPGPAGQPGKDGRGGYPGPIGPPGPRGNRGDSGPAGPPGQPGPSGPPGPPGPCCGG
VASLGGAEKGPVGYGYEYRDEPKENDINLGDIISSMKSINNQIENIISPDGSQKNPARNC
RDLKFCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLSANPSTVPRKNWWTSESSG
KKHIWFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDQA
SGNVKKALKLMSSVESEIKAEGNSRFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVV
DIAPIDIGGPDQEFGVDIGPVCFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt
attttggcacaacaagacgtcataggatgtacccatcttgggcaggtttacgctgacagg
gatgtttggaagccagagccatgccaaatctgtgtgtgcgactcaggatctgttctctgt
gatgacatcatctgtgatgaccaggagctggactgtcccaacccagagattccctttgga
gagtgctgtccagtttgtccacaaacaacaccacaacctacaagagttcctggagtaacc
caaggccccaaaggagaccctggtttttttggggttccaggcagaaatggttcccctggc
cctccgggacaaccggggagtcctggagctcctggccctcccggggtctgccagtcgtgt
cccagcataagcggaggcagtttttctccacagtatgactcctatgatgtgaaggccggt
tccgttggtattggttacccaccgcagcccattagtggctttccaggaccccctggcccc
agtggcccccctggcccgcctggtcatgcaggtccccctggctctgctggataccaaggt
tcccccggagaaccagggcaacctggccctcctggacctccaggacctgttggaatgata
ggcccagctggtccaccaggaaaagatggagaaccaggaagaccaggcagacatggagac
cgtggaatccctggaataccgggtcacaagggacaccctggaatgcctggggtgcctggg
atgaaaggtcaacgaggttttgatggaaaagacggtgccaaaggtgacagtggtgctcct
ggtccaaagggtgaaactggtcttcctggagcagctggggtgccaggccaaccgggacca
agaggtccaactggtgaaagaggaagacccgggagtcctggtggccctggtgcccatggc
aaagatggatctccaggagcagcaggcccacctggtcccccaggtccccctggaactgca
ggatttccaggctctccaggttttaagggtgaagctggtcctcctggtcctgctggttct
agtggtagccctggagagagaggagaacctggtcctcagggtcatgctgggccacctggg
cctcagggccctcctggaagagctggaagccctggtggcaagggtgaaatggtgagtact
tttcatattgctagtccagtaacgccatgctttcttcatctctgtctgctgttcactcct
ggtcctccaggtacaagcggaacccctggagcaaaaggccctccgggtgaacctggtaag
aatggtgcaaaaggagatccaggcccaaaaggcgaccgtggtgaaaacggcaccccaggt
gctcctggacctcccggtgaggaaggcaaaagaggcgcaaacggcgaacccggccagaac
ggcatccctggcacgcctggagaaaggggctcccctggtttccgtggcttacctggtagc
aatgggcttcccggtgaaaagggtcctgcaggtgaacgtggtagcccaggtcctcctggc
cctagtggacccgcaggagagcgtggacaggatggaggcccagggcttcctggaataaga
ggtttgcccggaatcccaggaagccctggaagcgatgggaaacctggccctccaggtagt
cagggtgactctggccgccctggtccacctggtccctcaggcccacgtggtcaaccaggt
gtaatgggtttccctggtcctaagggcaatgagggtgcgccaggtaagaatggagaaaga
ggccctggtggaccacctggaacacctggtcctgctgggaagaatggtgatgttggcctc
ccaggtcctcctgggcctgctggtgctcctggggagagaggagaaccaggagcatcaggt
ccaccaggcctccagggattgcctggtggaccaggaccagctggagagaatggaaagcct
ggagaaccagggccaaaaggtgatattggagggccaggattcccaggccctaagggtgaa
aatggtatcccaggtgaacgtggtgcacagggtgccccaggacctcctggagcaagaggt
ggcccaggccctgctggctcagaaggtgccaagggtcctcctggcccccctggtccccct
ggaggcacagggctgcctggcttacagggaatgccaggagaaagaggcgcttccggaagt
cctgggccaaaaggggataagggagaacctggtggcaaaggtgctgatggcattcctggt
gcaagaggagagagaggtaatgtaggtcccatcggtccacctggtcctgccggcccacct
ggagataagggagagactggtccagcaggtgctcctggtccaatgggttcccgtggtggt
cctggtgaacgaggagaacaaggtcttcctggacctgctggcttccctggagctccaggc
cagaatggagaacctggtgggaaaggagaaagaggcccacctggtctaagaggagaggct
ggaccccctggagctgcaggtccacaaggtggtcctggtgcaccaggtccacccggtccc
caaggaacaaaaggagaacgtggatctcctggaggccctggtgctgctggtttccctggt
gctcgtggtctacctggtccccctggtagcaatggcagtccaggtccccctggtaatgca
ggacctgcaggcaaagatgggcctcctggaccccctggtagtaccggtggtcctggcagc
ccgggacctgctggaacaagaggtgagcctggcccgccaggcgaaaaagggtcaccaggc
gcacgaggagaaaggggggcaccaggtgaaccaggtcctcaaggcatcgttggtggccgg
ggtagcacaggtttgccaggtctgcgtggcccgagtggcccccccggtatggcgggtgcc
aagggtgaagatggtaaaccaggcacgaacggtatcccaggagaacgcggtgctcctggg
ccacaaggtcctattggacagagaggcttacctggagagcctggcagagatggtaaccct
ggctcagatggctcacctggacgtgatggatccccaggaggcaaaggtgaccgtggtgaa
agtggctctcctggccctccaggacctcctggtcaccctggacctgcaggtagcagtggt
acacctggaaaagctggtgaaagaggatttcagggtccacctggccctcctggctctacc
ggtcctgctggtactcgtggtcctgttggtcctcaaggtcctcgtggtgacaaaggtgaa
cctggtgaacgaggcagcattggcataaagggtcatagagggtttcctggtactcccggt
ctccctggtcctcctggtcccctgggtccacaaggtgcaattggaagtccaggagcttca
ggtgccaggggtcccccaggaccagctgggcagcctggaaaagatggtagaggtggctac
ccaggtccaatcggtcctcctggcccccgtggtaacagaggtgacagtggccctgcaggt
ccaccaggccagcctggtccttctggtccccctggtcctcctggtccatgttgtggtggc
gtggcttccctgggtggtgctgaaaaaggtccagtgggctatgggtatgaatatcgagat
gagccaaaagaaaatgatatcaatctgggtgacatcatatcttcaatgaaatcaattaac
aaccagattgaaaatatcattagtcctgatgggtcacagaagaatccagctcgtaactgc
agagatctgaaattctgccatcctgagctcaagagtggagagtactggattgatcctaac
caaggctgcaaaatggatgctattaaagtatactgcaatatggaaacgggtgagacatgc
ctcagtgctaaccccagcactgtgccaaggaaaaactggtggaccagcgaaagcagtgga
aagaaacacatttggtttggagaatctatgaatggaggctttcagttcagctacggcgat
cctgagcttccagaggatgtctcagaagttcagctggccttcctccgcatcctctctagc
cgtgcctcccagaacatcacctaccactgcaagaacagcatcgcctacatggatcaagcc
agtggaaatgttaaaaaagctctgaaactgatgagctctgtggaaagtgagatcaaggct
gaaggaaacagcaggttcacatatgctgttctggaagatggctgtactaaacacactggt
gaatggggtaaaacagtctttgaatacaggacgcgcaagacaatgaggttgcctgtggtt
gatattgcacccatagatattggtggtcctgatcaggaatttggtgtggacattggcccg
gtctgcttcttgtaa
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