Falco cherrug (Saker falcon): 102052185
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Entry
102052185 CDS
T02911
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102052185 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fch03041
]
102052185 (PRPF40A)
Spliceosome [BR:
fch03041
]
Complex A
U1 snRNP components
U1 related factors
102052185 (PRPF40A)
Complex B
102052185 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
102052185
NCBI-ProteinID:
XP_014136637
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVNE
EHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP
YYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEESTPATSTPAAAAEATSTASTATTA
GETAAAVTTTAAASAATGAPEAETAAASSVGENESAGTAATEEQGQATSAPAGQEQNAEA
AANAADDSSKQEASADGASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASW
EQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHE
KMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALK
NILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEE
KQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVF
SSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATT
LDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIR
DRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSG
SESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIE
REKDKKERERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLL
EQLDEDQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggccacccaggtatgccacattaccctcccatgggaatgcaccctatgggtcagaga
ccaccaaatatgccaccagttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacggttccgccaggggtgaacagtatggat
gcgcaagtaggtgtaacgcctcctggaactcagagctctgttttgtttcgccctcagaca
acacatcctgtagtttgcgcagcccagcaaaccgccacaaccaacagttctgttaatgaa
gagcactctaaacagaaatccacgtggacagaacacaaatcacctgatggaagaacgtat
tactataatactgaaacaaagcagtctacgtgggagaagccagatgatctcaaaactcct
gctgagcaattgttgtctaagtgtccctggaaagagtataaatctgattctggaaagccc
tactattacaattcccaaacaaaggaatcacgctgggcaaaacccaaagagctggaggat
cttgaagcaatgattaaagctgaagaaaacagcacaaagcctgaagaatcaactccagcg
acatctactccagctgctgcagcagaagcaacaagcacagccagcacagccacaactgct
ggggaaactgccgcagctgttactaccaccgctgctgcttctgcagcaacaggagcccct
gaagcagaaactgctgcagcttcttctgtgggagaaaatgagagtgctggcacggcagca
actgaggaacagggacaagcaacatctgcacctgctgggcaggagcagaatgcagaagct
gcagctaatgcagcagacgactcttccaagcaggaggcctcagcagatggtgcttcaaag
aaagaggatgatgatgcccaaccagttaaaaaaacctatacgtggaatacaaaggaagaa
gcaaagcaagcatttaaagaactgttaaaagaaaagcgagtaccatccaatgcttcttgg
gagcaagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaaattaagt
gaaaaaaagcaagcatttaatgcttacaaagttcaaacagaaaaagaagagaaagaagaa
gcaagatcaaaatacaaagaggctaaagagtccttccagcgttttctcgaaaaccatgaa
aagatgacatctacaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtc
tggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttttttctg
tctaaaaaagagaaggaacaagccaaacagttacgaaagaggaattgggaagctttgaag
aacatactagataacatggctaacgtcacctactgtactacttggtcggaggctcagcag
tatctgatggacaatcctacatttgcagaagatgaagaacttcagaacatggataaagaa
gatgctctgatctgttttgaggaacatatcagggcattggaaaaagaagaggaagaagaa
aaacagaaaagcttgcttagagaaagaaggaggcagcgtaaaaacagagaatctttccag
ctatttttagatgaactgcatgagcatggacaactacattcgatgtcctcttggatggag
ttgtacccaaccataagctctgacatcagattcactaatatgcttggtcagcctgttttt
tcatcaggatcaacagcacttgaccttttcaagttctatgttgaagacttgaaagcacgt
tatcatgatgagaagaagataataaaggatatcttaaaggataaaggatttgtggttgaa
gtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagctactact
ttagatgcaggaaatatcaagctggctttcaacagtctgctagagaaggcagaagctcgt
gaaagagagagggagaaagaagaagctcgcaaaatgaagcggaaagagtctgccttcaag
agcatgttgaagcaagctactcctcccattgaactggacgctgtctgggaagatatcaga
gatagatttgtgaaggagccagcatttgaagacatcactctggagtctgaaaggaaaaga
atatttaaagatttcatgcatgtactagagcacgagtgtcagcatcaccattcaaagaac
aagaaacattctaaaaagtctaaaaaacatcacaggaagcgatcacgttctcgttcgggc
tcggagtctgaggatgacgatagccattcaaagaagaagaggcagcgttcagaatctaga
tcagtttctgaacgttcttccagtgctgaatctgagagaagttacaagaagtcaaaaaaa
cacaagaaaaagagcaagaagagaagacataagtctgattcaccagaatcagatattgaa
cgagagaaagacaaaaaagaaagagagagggaaagcgaaaaggatagagctagacaaaga
tctgaatcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaactgg
gacacttctggcagtgagctgagcgaaggggagttggaaaaacagaggaggactcttttg
gaacaactggatgaagatcaatga
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