Falco cherrug (Saker falcon): 102052258
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Entry
102052258 CDS
T02911
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04382
Cornified envelope formation
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
fch04518
Integrin signaling
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102052258 (COL4A5)
04518 Integrin signaling
102052258 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102052258 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102052258 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102052258 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fch04147
]
102052258 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102052258 (COL4A5)
Exosome [BR:
fch04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102052258 (COL4A5)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102052258 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102052258
NCBI-ProteinID:
XP_027659464
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search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NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgaagcaggtgaaataattacatccttcctgccaggacagaagggcgacccc
ggatttccaggtcttccagggatacctggcccacctggcgccatgggaataccaggtcca
attggccctccagggcccccaggtttgacaggacctcctggtccaccagggctgccagga
cctaagggtaatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggt
cttcagggacctccagggccaccaggacaaattggagaacagaagagaccaaatgacatt
gagtttcagaaaggagatcagggtattccaggtgatccaggcccaccaggacttcctggg
ccacaaggccctcctggtcttcccggtggcgtaaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaagcctggcaaagatggagagcctggtcagcctggtagggatggt
ttacctggtgggcctggaataaacggtgctccaggaagagagggtgaaaagggtgaaaaa
ggtgacatcggtccccctggtcctcctggaattgtcatttcaagaccaggcattgatgca
gcagtgggaccaaaaggcagcaaaggattgccaggactgccgggagccaaaggggagcgt
ggattctctggtaggccaggcccacctggcttgccaggttctccagggatcactactgtt
ggacctcctggcccacctggcttacctggtgagagaggtcagaagggagatccaggttta
cctggtgtttctattccggggcaaccaggacttgatggaccacgaggacctccaggacca
ccaggtcctccagggccacctgcaccatctgttcctcctggtgaagggttatgtgagcag
gggccaccaggtcctccaggaattccaggacaacaaggctttacaggggagcgaggccaa
aaaggtgatcaaggagacacatgcttcaattgcataggagctggtgtaactgggcctcct
ggggagagaggaccaccaggacctccaggtagtccaggttctcctggttttcctggacca
aaaggtgaaaaggggcttcctggattaactggccttgtagggccaccaggattcccaggg
tccccaggtgctcctgggagacctggtcctaaaggagacccaggggatgtcctgacttct
ccaagaatgaaaggtgacaaaggagaccccggcttcccaggacctccaggtcttccgggc
atagatggcactcctgggcgagatggactgccaggtctacctggccctaagggggaacct
ggcagtgttgcattcaaaggagaaatgggtattccaggtgatccaggaataccaggtcct
cctggagacaaaggacttcctggacctcctggttttggtccacaaggttcacctggtgaa
aagggcatccaaggtgtttcaggccgtcccgggcctcctggggttcctggtccaaaaggt
gaccctggccagactattacagaaccaggagttccaggccctcctggtcctccaggaaga
aatggtgacccaggtcttccaggagatcctggtcagccaggtcagcgtggcttatcaggc
atcccaggtgcaaagggagagccaggtattcctggcattgggcttccaggtccaccaggc
ccaaaaggtttcccagggactccaggcccccccggagctccaggaactccaggtcgccct
ggtctagatggacctcctggaccacctggtttcccaggacagaagggggatcgtggattt
ggagttccaggaccacctggacccccaggaccaccaggcacaaagggagttcaagggccc
aaaggtgatcctggcttcccaggaaaccctggtctcccaggacgggcaggttttgatgga
actccagggcccaaaggtgaacctggaccaagtggaccaccaggactcccaggcccacca
ggcatccctggcattggtggtcaaggtccacctggatctccaggacctccaggtcctgtt
ggccccccaggttccccagggttgcagggcattccaggggagaaaggggatccaggtcct
ccaggcttcgacgttcctggtcccccaggtgaccaaggagccccaggatatccaggaccc
cctggtctcccagggcctcagggttcacctggaccacctggccgggatggcgtacctgga
tttccaggtgccaaaggtgagatgggcgtcatgggaactcctggtcctccagggcctcca
ggaactcctggaagaaatggcctgcctggcttgaaaggtaataatggattacctggtccg
ccagggcctcctggaccagtaggacagaaaggcatcaaaggtgaagcaggcctgccaggt
ccacctggaaaacttgatccgaaacagctaggagctaaaggagaaaaaggcgagccaggt
gttccaggtattcctggtttatcaggacagaagggttatcaaggtctcccaggtgaccca
ggcccaccaggacttagtggcccaccaggtgtgccaggattgccaggtatcaagggagat
atggggcttcctgggcagccaggaccaacaggacctccagggttaaaaggtaccatggga
gagatgggcctaccaggtcccccagggtttaaaggcagccaaggaacagcaggacatcca
gggcaacctgggcctacaggatttcctggactgaaaggggagaaaggtgaccctggtctt
tcaagcatcggtattcctggtctccctggaccaaagggtgatcttggtttgcctgggtac
ccaggtagtccaggcagtaaaggtattgctggaaatcctggtttgcctggatttccaggc
agcccaggtgcgaaaggagaaccaggccttcctggattcccaggaacacccggaattcca
ggaccgaaaggtatcgaggggcctccaggtaatcctggcctgcctggaccacctgggcca
gtaggtgaaactggtcgtcctggccctcctggtccttcaggggagaagggacagcctggt
cgagatggtatccctggaccagctggtcagaagggtgaaccaggtctaccaggttttggg
cgcccaggacctccaggactcccaggattgtcagggcagaaaggagaactggggttacct
ggcccaccagggccccctggacttccaggtctgaagggagaaccaggtttccagggattc
cctggtctacagggtccaccaggtccaccaggattaccagggccacctctggaaggtcct
aaaggtagccctggcccaccaggtgttccaggaaggccaggtcctccaggtccaccaggc
ccagaaggtccacgagggccaccaggcagtggaggacttaaaggggaaaaagggaaccca
ggtccacctggcccacctggcctgactggccaaaagggagaccaaggaccacctggacgc
cagggggatcctggccgtccaggtctgaatggaatgaagggcgaccccggggttccaggc
gttccaggattcccaggtatgaagggtcccagtggacctgcgggacccgctggcctcaca
ggcagccaaggactgccaggcccaccaggtccgccaggtttacccggtaccattggacga
agcatagttgtcaaaggtgaccctggtcccccgggtcctccaggacagcctgggtcgaaa
gggccacctggactgccagggccacagggattgccaggtccaattggtcttcctggtgac
ccagggcgagatggactacctggttttgatggtccagcaggacgtaaaggagagagaggt
cttccaggccagccaggttcacgaggaatacagggacctcctggtcctgatggcttacaa
ggcccacctggacctcctggaacagcttctgttgctcatggattccttataactcggcac
agccagaccagggatacaccactgtgtccgcaaggaacatcaagaatatatgatggattc
tctcttctgtatgtgcaaggaaatgagagagcacacggccaagatttgggtactgctggg
agctgtctcagacgtttcagcaccatgcccttcatgttctgcaacatcaacaacgtttgt
aattttgcatcaaggaatgactattcctactggctgtcaactccggagccaatgccgatg
agcatggagccactgactgggcagagcatccagccattcatcagccgatgcgttgtgtgc
gaagctcctgcgatggtgatagctgttcacagtcagaccattcagattccctcctgtccg
ccaggctgggactccctttggatcggttactctttcatgatgcacactagtgctggagca
gaaggctctggacaggccttggcatcgcctggatcctgtttagaagaattccgctcggct
ccgtttattgaatgccatggtcgtggcacttgtaattactatgccaattcatatagtttc
tggctggcaactgtagaggtgtcagaaatgttcagtaaacctcagtcagagacactgaaa
gctggagacttgaggacgcgtattagtcgttgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system