Falco cherrug (Saker falcon): 102052429
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Entry
102052429 CDS
T02911
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102052429 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102052429 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102052429 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fch04147
]
102052429 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102052429 (COL4A6)
Exosome [BR:
fch04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102052429 (COL4A6)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102052429 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102052429
NCBI-ProteinID:
XP_027659475
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
LLLLLLSLGAELASGGGKKSYSGPCGGRDCTAGCKCFPEKGARGRPGPIGLQGPIGAPGF
TGPEGLPGAKGERGAVGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGC
NGTTGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPK
GFPGPVGSAGPIGLPGFQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTG
ILEFMGFPKGKQGEKGEPGPQGFPGAKGLPGIPGFGGAGEKGEKGVPGLPGGRGLLGLDG
SDGIPGRKGHPGIPGYPGLDGVEGMKGELGDVGPPGPPIVIDREGVVISGAPGDPGNPGI
PGPPGDEGIGGLPGLPGAPGFPGLERDGMGLGGSPGVPGVKGEVGEPGRATIGFPGTPGR
AGLPGLAGAPGLPGSPRPSFPPDTILNGRTGAPGEPGQRGLPGALGPKGYKGEAGDCACD
GGVTRAGLKGISGPPGPSGSPGVPGIKGVGGDPGTVGAPGLRGPPALAGQQGFPGPKGEK
GDSSFATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPG
LPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGP
PGTPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGFPGIIGLQGEPGFPGPRGEQGSPGL
PGLDGTDGLPGKMGASGLAGAKGAPGDVFGAESGALGERGRPGLPGDKGLTGDLGFPGPK
GLDGRPGLLGIKGEQGNPGYSGIPGLRGPPGPGGPFGIKGKPGPLGSVGLAGAPGCQGLP
GAKGLTGDVGPQGPAGMKGFPGPDGAPGSPGERGFLGPPGPFGQDGRPGFSGPKGEKGSS
GLLGFPGMPGLPGVPGVNGFKGAPGTAGGKGSPGAVGLQGQKGDRGDVGPPGLPVLGPPE
QALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPVGSASKERGLHGDPGFPGP
PGRPGLPGQKGAHGIIGFQGMPGERGSDGVTGTLGFPGPIGLPGPKGDQGESXGIAGPKG
ERGDPGFPGERGRDGFKGEPGYAGNTGVNGLKGGPGDLGQEGPAGIPGNAGLRGTPGPPG
PPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGP
KGEEGSPGLGRGALGFPGPKGSAGDMGPPGPVGLPGLPGTPGASLPSDIRGRPGDAGHPG
ADGSSGLPGPPGPRGPPGPASDQGDTGNPGFPGVLGLRGIKGDVGPTGPIGLPGASGFKG
IRGEPGLMGMPGKDGPVGDPGYPGLKGEMGRRGLPGRQGAPGITPQPEEVTAPAGLPGLP
GIDGVPGFDGEPGFQGPAGKPGAKGLPGRSGLKGRDGLPGSPGIVGDPGPLGAPGPQGFE
GVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSH
NQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSAQIPQYI
SRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCL
EDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQ
VCMKNL
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
ctgctgctgctgctgctctcgctgggcgccgagctggcgagcgggggtggaaagaagtct
tacagtgggccatgtggaggtcgtgattgcaccgctggatgcaaatgttttccagagaag
ggtgcgcggggtcgaccaggacctattgggcttcaaggaccaataggtgcacctggattc
actggcccagaaggtctgccaggagcaaaaggtgagagaggagcagtgggcccccctgga
ccagctggacagaagggcgacaagggcccaatgggagttccaggatttcaaggcatcaat
gggatcccgggtcaccctgggcaatctggacctagaggtctgcctggcctcgatggctgc
aatggtaccactgggagtcccggcgtttctggatcagatgggtttcctggcctgcctggg
ttgcctggtcgtcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagc
cttaaaggaatgaagggagaaaatggtcttcctggattggatggaatttctggcccaaaa
ggttttccaggtcctgtaggttctgcaggccctataggattaccaggttttcagggtcca
atgggtccccctgggccaccaggtccaaaaggtaacatgggactaggctttcaaggagag
aagggagaaaagggtgatgttgggctgccaggccctccaggtcccccaccatccactgga
atactggaattcatgggatttccaaaagggaagcaaggagaaaagggtgagccaggcccc
caaggattccctggagccaaaggattgcctggcataccgggctttggaggtgctggagaa
aaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtcttctgggactggatgga
tctgatgggatcccagggagaaagggtcatccgggtattccaggctatccaggactggat
ggagtcgaaggcatgaagggtgaattaggtgacgtcggtcccccaggccctcctattgtt
attgacagggaaggtgtagtcatttcaggtgccccaggtgaccctggaaacccaggaata
cctggtcctccaggagatgaagggatcgggggtttaccaggccttccaggagctccaggg
tttccaggcctggagagagatggaatgggccttggagggtctccaggtgttccaggtgtg
aagggtgaagtgggagaaccaggaagagcaacaattggattcccaggcactcctggcaga
gctggtttaccaggtctggcaggagcaccaggattgcctggttcaccacgcccttcgttc
cccccggacacaatcctgaatggaaggactggggccccaggggagcctggtcaaagaggg
ctgccaggagctttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgat
ggaggagttacaagagctggtctaaaaggcatctcaggtccaccaggtccgtcgggaagc
cctggtgtgcctgggattaagggcgttggtggagacccaggcactgtgggtgcaccagga
ctgcgaggccctccggctttggctggtcagcaaggttttccaggccctaagggagaaaaa
ggggattcgtcctttgcaacaggcagaggtgctcgtggggaccgtggtgcgacagcaccc
agaggaccttcaggcatcccaggaacccctggcagggatggacttccaggcttgcctggc
ccaccaggccctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccagga
ttgcctggctccaagggccatcgtggagaaactggttctcctggcgttggatatccaggt
cctagtggagttcgtggaccaccaggtgacccaggaatggatgggtttccaggacaagca
ggtcttccaggccctccaggtatcaccttgccctgcatagttcctggagcgtatgggccc
ccagggactcccggctttccaggattgccaggtcccaaaggcagcaagggctttcctggc
attccaggccaacctggactacatgggtcaaaaggacagccaggatttccaggaataata
ggcttgcaaggggaacctggcttccctgggcctcgaggagagcaagggtcaccaggactt
ccaggactggatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctgga
gcaaaaggagctcctggagatgtgtttggtgctgagagcggagccctgggagagcgtggc
agacctggactcccaggtgataaagggcttacaggtgatcttggatttccaggaccaaaa
gggttagatggaagaccaggcctcctaggtattaaaggcgaacagggtaacccaggatat
tcaggcatccctggactgcggggacctcctggtcccggaggtccttttggcattaaggga
aaaccgggacccttggggtcagttggccttgcaggagcaccaggctgtcaaggtcttcct
ggagccaaaggcttgactggggacgtaggtccacaaggccctgctggcatgaaaggcttc
ccaggtcctgatggtgctccaggatctcctggggaaagaggattcctagggccaccaggg
ccttttggtcaagatggacgtccaggtttctctgggccaaaaggtgagaaagggtcttct
ggcctgcttggtttccctggcatgccagggctgcccggtgtccctggggtcaatgggttt
aaaggagctcctggcacagctggaggaaaagggagccctggagctgtgggactccaaggt
caaaaaggtgacagaggtgatgtaggtccacctggccttcccgttcttgggcctccagaa
caggcactgcaattcaaaggagacaaaggagatcctggattagctggacttgggggattc
cctggacctagaggtgataaaggaatcccaggaagccgtggacagcctggtctccctggg
ccagttgggtcagcaagcaaagagaggggtcttcatggtgacccaggcttccctggccca
cctggacggcctgggctgccaggacagaagggtgcacatggtatcataggatttcaagga
atgccaggagagaggggttcagatggtgtcacaggaacactcggattcccaggacctatt
ggcctccctggtccaaagggtgaccagggagagtctnctggcattgctggaccaaaagga
gagcgaggggacccgggattcccaggagagagggggcgagatggattcaagggtgaacca
ggctacgcaggaaacactggagtaaatggactcaaaggaggcccaggagatcttggccaa
gaaggaccagcaggaatccctggaaatgctgggctgagaggaacccctggaccaccagga
cctccagggcagccaggatctgttggattccctggagctcgtggaacagcaggacctaaa
ggatttcatggatttccgggtttaaatggtctgaatggcttgccaggcacaaaaggatct
cctggaacaccaggtctaagtgaagctggacttaaaggccctgcaggcctcccaggtcca
aagggtgaagaagggtctccaggcttgggtagaggagctctaggattccctggaccaaaa
ggctcagctggagacatgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cctggagcttctcttccttctgatatacgtgggagacctggggatgctggccatccagga
gctgatgggagctcaggtcttccaggtcctccaggcccacgagggccccctggcccagct
tctgaccaaggtgacacaggcaatccaggtttccctggtgttcttggcttgcgaggcatt
aagggtgatgtgggacccactggtccaatcggactccctggagcatctggattcaaaggt
ataagaggtgagcctggccttatggggatgccaggtaaagatgggccagtgggggatcct
ggttaccctgggctgaaaggtgaaatgggccgtcgaggtctccctggccgacaaggggct
cccggtataaccccacagccagaagaagtcacagcccctgcaggcctgcctggtctgcca
ggaattgatggtgtccccggctttgatggagagcctggattccagggcccagctggaaaa
ccaggtgcaaaaggtctgccaggaagatctggtttgaaaggacgtgatggtttgcctgga
tcacctggcatagttggggatccagggcctttgggtgccccaggaccacagggatttgaa
ggtgttgctggaaagccgggctcgcttggtttgccgggaatgcctggtcggagcgtgggt
gttggatacactttagtgaagcacagtcagtcggaccaaatcccgccttgtcccatagga
atgaataagctctgggatggctacagcttattgtatgtggaggggcaggaaaagtcacac
aaccaggatctcggttttgctggctcatgtttgcctcgcttcagtaccatgccttttatt
tactgcaacatcaatgaagtgtgctactacgccagccgaaacgacaagtcctactggctc
tccaccactgcccctatccccatgatgcccgtggacagcgctcagatcccgcagtacatc
agtcgttgctcagtgtgtgaagcaccttcccaggcggtggctgtgcacagccaggacatc
accatcccacagtgtcccctcggctggcgcagcctatggataggatactccttccttatg
cataccgcggccggtgcggaaggtggcgggcagtccctggtctcgcctgggtcctgcctg
gaggatttccgcgctactccgttcattgaatgcaacggcgctcggggcacctgccattac
ttcgcaaacaaatacagcttctggctgacgacggttgagcagtcgcagcagtttgtcagt
gctcctccctcagaaactctgaaagcaggacagcttcgaacgagggtcagccgctgccaa
gtgtgcatgaagaacctgtag
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