Falco cherrug (Saker falcon): 102053439
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Entry
102053439 CDS
T02911
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fch03021
]
102053439 (CHD1)
03036 Chromosome and associated proteins [BR:
fch03036
]
102053439 (CHD1)
Transcription machinery [BR:
fch03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102053439 (CHD1)
Chromosome and associated proteins [BR:
fch03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102053439 (CHD1)
SLIK complex
102053439 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
102053439
NCBI-ProteinID:
XP_014141856
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MNGHSDEESIRNSSGESRVCLSRVLCKSADFVPHCVVLSEAPCFKGRSDDDSGSASGSGS
GSSSGSSSDRSSSQSGSSDSDSGSESGTQSESESDTSREKKQIQAKPPKVDGSEFWKSSP
SILAVQRSAVLKKQQQQQKTASSDSGSEEDSSSSEDSPDDSSSETKKKKHKDEDWQMSGS
GSVSGTGSDSESEEDRDKSSCEESESDYEPKNKVKSRKPPSRIKPKSGKKNAGPKKRQLD
SSEDDEEEEEEEDDDDDDDDDYDKRGARRQATVNISYKEAEETKTDSDDLLEVCGEDVPQ
PEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADGDPNAGFEKSKEPGEIQYLIKWKGW
SHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLH
KQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQ
SKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILA
DEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNSVVYLGDI
TSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSL
LYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS
LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST
SGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGN
RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR
AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER
AKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ
EPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEE
IIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISE
RKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSEIDL
RRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFRISGVQVNAKLVISHEEELAPLH
KSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT
QKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRTKKNKVIK
AAKIKDEIKSDSSPQPSEKSDEDDDEDNKDEIVSVKHPHKKIKAEKENEEKPEPDIGIKK
EAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIKEKRENKVKESTQKEVKEEKVNEIK
SESKEKTKKIPLLDTPVHITATSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRP
EKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLH
KLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQ
YHDHYKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWDHYKQDSRYYSDSKHRKLDDYRSR
DHRSNLEGSLKDSRAHLDHRSHSDHRIQSDHRSISDYSHHKSSRDYRYHSDWQMDHRASG
SGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcataagaaacagtagcggggagtcaagggtttgt
ctttccagggtcttgtgtaaatcagcagactttgttcctcattgcgtggtcctgtcagag
gcaccttgttttaagggccgatcagatgacgattccgggtcagcatcaggttctggatct
ggttcaagctctggaagcagtagtgacagaagcagcagccagtcaggcagcagtgactct
gactctggttcagagtcaggcactcagtcagaatcagagtctgacacatctagagagaag
aaacaaattcaagctaaaccaccaaaagttgatggatctgagttctggaagtctagtcca
agtatacttgctgtgcaaagatcggcagtactgaagaaacaacagcaacaacaaaagaca
gcctcatcagacagtggttcagaagaggactcatcaagtagtgaagattctccagatgac
tcatccagtgaaaccaagaagaaaaaacataaagatgaagactggcaaatgtcgggatca
gggtcagtatcgggaactggttccgattctgaatcagaggaagatagggacaaaagcagt
tgtgaagagagtgaatctgactatgagccaaaaaacaaggtcaaaagccgtaaacctcca
agcagaattaagccaaaaagtgggaaaaagaatgcaggaccaaaaaagaggcaacttgat
tcatcagaggatgatgaggaggaagaggaggaggaggatgatgatgatgatgatgatgat
gattatgataagaggggagctcgtcgccaggcaacagtcaatattagttacaaagaagct
gaagaaaccaagacagattctgatgatttgctggaagtttgtggagaagatgtcccacaa
cctgaagaagatgaatttgaaactatagagaagttcatggatagtcgagttggccgaaaa
ggagccacgggtgctgcaaccaccatctatgcagttgaggcagatggtgacccaaatgct
gggtttgaaaagtcaaaggagccaggagaaatacagtatcttattaaatggaaaggttgg
tcacatatccataacacttgggaaactgaggaaactctgaagcaacaaaatgttaaagga
atgaagaagctggacaactataagaaaaaggatcaggaaacaaaacgatggctgaaaaat
gcttctccagaagatgtggaatattataactgccagcaggagcttacagatgatctccat
aaacaatatcagatagtggaaagaataattgctcattcaaatcagaaatcagcagctggt
tatccagactactattgtaaatggcaaggtctgccttattcagaatgtagctgggaagat
ggggctctcattgccaaaaagtttcaggcacgcattgatgagtactttagcagaaatcag
tccaagaccactccctttaaggattgcaaggttctaaaacagaggccaaggtttgttgca
ttaaagaagcaaccatcctacattggaggacatgaaagtttggagttaagagattatcag
ttaaatggtttgaattggcttgctcactcatggtgcaaagggaatagctgtattcttgcg
gatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaactacctgtttcat
gaacatcagttgtatgggcctttcttgctggttgtgccgctttctaccttgacatcttgg
caaagagagattcaaacttgggctcctcagatgaattctgtagtttacttaggagatata
actagcagaaacatgataagaactcatgaatggatgcatccacaaaccaaacgattaaaa
tttaacatacttctaacaacctatgaaattttgctgaaggataagtcattccttggtggt
ctgaattgggcattcataggagttgatgaagctcatcgtttaaaaaatgacgactctctt
ctgtacaagactttaatagactttaagtctaaccatcgtcttcttattactggaacccct
ctgcaaaactctctcaaagagctctggtctttgttgcacttcatcatgccagaaaagttt
tcctcctgggaagattttgaagaggaacatggcaaagggagagaatacggttatgcaagt
cttcacaaagaactggaaccatttctgctgagaagagttaaaaaagatgtagaaaagtct
ttgcctgctaaagttgagcaaattctgaggatggaaatgagtgcattgcagaaacaatat
tacaagtggattttaactaggaattataaagccctcagtaaaggttcaaaaggcagtacc
tcgggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcatt
aagccaccagatgataatgaattctataataaacaggaggccttacagcatttaatacgt
agcagtgggaaactaatccttcttgacaagctactgattcgtctgcgagaacgtggcaac
agagttctgattttctcacagatggtgaggatgctggatatcctagcagaatatctgaag
tatcgtcagtttccctttcagagacttgatggatcaataaaaggggaattgaggaaacaa
gcgttggatcatttcaatgcagaaggatcagaggacttctgctttttactgtctaccaga
gctggaggattaggtatcaatttggcatccgctgacactgtagttatatttgattctgac
tggaatccacagaatgatctgcaagcgcaggccagagcgcataggatcgggcagaagaaa
caggttaatatttatcgactagtcacaaaaggatcagtagaagaagatattcttgaaaga
gccaagaaaaagatggtgttagatcatttagtaattcagagaatggacactacggggaaa
actgtactacatacaggctctactccttcaagctcaacgccttttaataaggaggagtta
tcagcaattctgaagtttggtgctgaggaactatttaaagaacctgaaggggaagaacag
gaaccccaggaaatggatatagatgaaatcttgaagagggctgaaacacgggaaaatgag
ccaggtccattaactgtaggagacgagttgctttcacagttcaaggtggccaacttttcc
aatatggatgaagatgatattgagttggaaccagaaagaaattcaagaaattgggaagaa
atcattccggaagttcagcgacgacgaatagaagaggaggaaagacaaaaggaacttgaa
gaaatatatatgcttccaaggatgagaaactgtgcaaaacagatcagctttaatggaagt
gaagggaggcgcagtaggagcagaagatactctggatctgatagtgactccatctcagaa
agaaaacggccaaaaaaacgtggaagaccacgaactattcctcgagaaaatatcaaagga
tttagtgatgcagagatcaggcggtttatcaagagttacaagaaatttggtggcccgctt
gaaaggttagatgctgtagctagagatgctgagctagttgataaatcagagatagatctt
agacgtttgggagagcttgtacataatggatgcattaaagctttaaaggacaactcatct
ggacaagaaagagcaggaggtagacttgggaaagttaaaggcccaacattccgaatctca
ggagtacaggtgaatgcaaagctagtcatctctcacgaagaagagttggcaccactgcac
aaatccattccatcagatccagaagaaagaaaaagatatgtcatcccatgccataccaag
gctgctcatttcgatatagattggggtaaggaagatgattccaatctgttaataggcatc
tatgaatatggttatggcagctgggaaatgataaaaatggatcctgatctcagtttaaca
cagaagattttgcctgatgatccagataagaaaccccaggcgaaacagttacagacccgt
gcagactacctcattaaattactgaacaaagaccttgcaaggaaggaagcacaaaggctt
gctggtgcaggcaattcaaagaggaggaaaacaagaactaagaagaataaggtgataaag
gctgcaaaaataaaagatgaaataaaaagtgattcttcaccacagccttcagaaaaatct
gatgaagatgatgatgaggataacaaggatgagattgtttcagtgaaacatccacataaa
aaaattaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtataaagaag
gaagctgaagaaaagagagagacaaaagaaaaggaaaataagagggatttgaaaagggag
aaaaaagaaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaagagagaa
aacaaagttaaagaatctacacagaaagaagtaaaggaagagaaggtaaatgaaatcaaa
tctgaaagtaaagaaaaaactaaaaaaattccactgttggatactccagttcatattact
gcaactagtgaaccagttcctatatcagaagaatctgaagaactggatcaaaaaactttt
agtgtgtgcaaagaaagaatgaggcctgttaaagcagcactgaaacagttggatcgacca
gagaagggcctttctgaaagggagcagctggaacatactagacagtgtctaatcaaaatt
ggggatcacattactgaatgtctgaaggagtacacaaatcctgaacaaattaaacagtgg
agaaaaaacttgtggatttttgtgtcgaagtttacagaatttgatgccagaaaactacac
aaactatataaacatgcaatcaaaaaacgccaagagtctcagcaacacaatgaccagaat
attagcagcaatgtgaatacacatgtaattagaaatccagatgtggaaagattgaaggaa
aatacaaatcatgacgacagtagcagggacagttattcttctgatagacatttgtcacaa
taccacgatcattataaagacaggcatcagggagacgcttacaagaaaagtgactctagg
aaaaggccctattcagccttcagcaatggaaaagatcacagagactgggatcactacaaa
caagacagcagatactacagtgatagtaaacatagaaagttagatgactacaggagcaga
gaccacaggtcaaacctggaaggaagtttaaaagacagccgggctcatttggatcaccgt
tcccattcagaccacaggatacaatcagatcaccgttccatttcagattacagccatcat
aaatcttctagagattataggtaccactcagactggcaaatggaccacagagcttcgggt
agtggcccaaggtcaccattagatcagaggtctccttatggttcaagatctcccctagga
cacagatctccatttgaacattcatcagatcacaaaagtacacctgaacatacatggagt
agccggaaaacataa
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integrated database retrieval system
