Falco cherrug (Saker falcon): 102053480
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Entry
102053480 CDS
T02911
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X4
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fch03000
]
102053480 (RC3H1)
04121 Ubiquitin system [BR:
fch04121
]
102053480 (RC3H1)
Transcription factors [BR:
fch03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102053480 (RC3H1)
Ubiquitin system [BR:
fch04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102053480 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
102053480
NCBI-ProteinID:
XP_014138777
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKASALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMEHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPPRAPTDLPSVSVTKQLQMVPRGSQLYNTPQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFASSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANIDSKAMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSV
ISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME
LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELH
QVEREIGKRTRELSMESQSSLDMKNKLGTNKQTENGQLEPQSKVPAEDLALTFSSDVPNG
SALTQENIGLLSSKTVSLSLSEDPEGGGENHDSQRAGVTPTSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacagact
ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaattcagccttgctgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagacaccaagcattatgaggagggcaaa
aaatgtgtggaagagttggcgttgtacctcaaaccactcagcagcgcgagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcccatgcaacggaaacttgtgacatta
gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtca
cttggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcagcagctctcc
tccaacctctgggctgcagtgagagccagggggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctgctggctctggaagatggatctgctttgtcacgaaag
gtcttggttctctttgtggttcagaggctggagccgcgatttcctcaagcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcgg
gatgaggattcctctctgatgcaactgaaagaggaatttcggacttacgaagctctgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatacggagaccagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgcgcagagtgttcaggaactaactattgct
cttcagaggaccggagatccagctaacctgaatcgtcttcgacctcacctagagctcctg
gcaaacattgatcccagtccagatgctccacctccgacatgggaacagttggaaaacgga
ctagttgctgtgaggactgtggttcacggcttggttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcaacacagcaagtacaagacatacatgtgcaga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa
gggggagtggacttgcccaatagaaaagcttctgctctgccaaatggaattgtgtcaaca
ggcagcacggtgacgcaacttatttctcgagggactgactccggttatgaaactgctctg
aagccagggaagatggaacatctgagtagcagtgcccctggatctcctcctgacttgctg
gaatctgtccccaagagctctatttctgccttgccagtgaaccctcatcctgtaccccct
cgggctccaacagacctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacgg
gggtctcagttgtataatactccacaagcggatatgttttatcaagatcctagaggagct
gccccaccattcgagccagcaccctaccaacaaggagtttactatcccactcagtccatg
tctcgctttgtccgacctcctccatcggctcctgaacctggtccaccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccacagcagtat
cctcccatgggacaacccatatacccaccgcactatgacagccgtcgcgtgtatccccct
gtccagccgtatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca
caagcagctgtaccatcctacgttcctgaatccagagacagataccagcaaacggagggt
tattgcccagtggctccgcatctcggtcagatcagaccttcatgccacaggcctcatccc
agcctggatgaacttcaccgacgcagaaaagagatcatggcccaactagaagagaggaag
gtgatttctccacctccttttgcatcctcaccaaccttgcctcatccttttcattcagag
gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaatgactacagccag
tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagatgttgtggcagcgaggagtgtggagatggcgaacatagatagtaaagccatgcgt
gaccaacgattagacatgcagcgaagagcagcagagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcgagatttggggctatctctcgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggctgttcagggagctaccaccaaatcggtc
atttcagactacaatccttacggaactcacggtggctggggaggctctccatattctcct
catcaaaatataccttctcagggacgtttcaatgacagggagagactgtccatgtcagat
gtggctggtcatgggaaacagttaccctcagcagaacgagagcagcagctgcgcatggag
ctgcagcaagtagaccatcagattagccagcagacacagatgcgaggactagaggctgtt
agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca
cccccacctcccaagtggcctgggatgatctcaagtgaacagctgagcttggagctacac
caggtggaaagggaaattgggaagagaacccgtgagctgagcatggaaagccagtcttca
ctggatatgaaaaacaaactgggcacgaataaacagacagaaaatggacagttagaaccg
caaagcaaggttccagctgaagacctcgcactgacattcagcagtgatgttccaaatgga
tcagccttgacacaagagaacattggcctcctgtccagcaagacagtgtctctcagcctg
tcagaggacccagagggaggaggagaaaaccacgactcccagagagcgggagttacaccc
acatctgctccatga
DBGET
integrated database retrieval system
