Falco cherrug (Saker falcon): 102054435
Help
Entry
102054435 CDS
T02911
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03250
Viral life cycle - HIV-1
fch03272
Virion - Hepatitis viruses
fch04144
Endocytosis
fch04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102054435 (VPS4B)
03272 Virion - Hepatitis viruses
102054435 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102054435 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
102054435 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fch04131
]
102054435 (VPS4B)
03400 DNA repair and recombination proteins [BR:
fch03400
]
102054435 (VPS4B)
Membrane trafficking [BR:
fch04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
102054435 (VPS4B)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
Check point factors
Other check point factors
102054435 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
RuvB_N
AAA_14
AAA_5
AAA_22
IstB_IS21
AAA_25
DUF815
AAA_18
AAA_2
NPHP3_N
nSTAND3
AAA_33
RNA_helicase
AAA_24
PhoH
AAA_17
USP8_dimer
ResIII
AAA_7
Mg_chelatase
AAA_28
NACHT
Parvo_NS1
Tae4
bpMoxR
Motif
Other DBs
NCBI-GeneID:
102054435
NCBI-ProteinID:
XP_005434992
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MLKSRKTDHQKSQSNSLKCLCDDAKCTHTTFDDLIVLQKAIDLASKAAQEDKAGNYEEAF
RLYQHAVQYFLHVVKYEAQGDKAKQSIRMKCAEYLDRAEKLKEYLKKKEKSAPKPVKESG
PTDGKGNDSDGEGESEDPEKKKLQNQLQGAIVMERPNVKWSDVAGLEGAKEALKEAVILP
IKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLGESE
KLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNEGIL
VLGATNIPWVLDSAIRRRFEKRIYIPLPEDHARAAMFKLHLGSTPNLLTESDYRELGKRT
DGYSGADISIIVRDALMQPVRKVQSATHFKKVKGPSLSNPNTMVDLFTPCSPGDPEAIEM
TWMEVPGDKLLEPQVSMIDMLRSLASTKPTVNEQDLEKLKKFTEDFGQEG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagagcagaaaaactgaccatcaaaaaagtcagagcaacagcttaaaatgtctc
tgtgatgatgcaaaatgcactcacacaacatttgatgatttgattgtgttacagaaagca
atagaccttgctagcaaggcagcacaagaagataaagcaggaaactatgaggaagccttc
cgcttgtaccaacacgctgtgcagtattttctccatgttgttaaatatgaagcacagggt
gataaagcaaaacagagcattagaatgaaatgtgcagaatacttggacagagcagaaaag
ctgaaagaatatctgaaaaagaaagaaaaatctgcaccaaaaccagttaaagagtctggt
cctactgatggaaaagggaatgatagtgatggggaaggggagtcagaggatcctgaaaaa
aagaagctacagaatcagcttcaaggagcaattgttatggagcgaccaaatgtcaaatgg
agtgatgttgctggccttgaaggtgccaaagaagcacttaaagaagcagtgatcttgccc
attaaatttccacacctgtttacaggaaagagaacaccttggagagggattctcctgttt
ggaccaccaggaacaggaaagtcttatttagcaaaagctgtggcaacagaagcaaacaac
tctaccttcttctcagtatcttcctctgaccttgtctcaaagtggttaggtgaaagtgaa
aaattagtgaaaaacttgttccagcttgccagagaaaacaaaccttctattatcttcatt
gatgagatagattctctctgtgggtcaagaagtgaaaatgaaagtgaggctgctagacgg
ataaaaacagaatttctagtccagatgcaaggggttggtgttgacaatgaaggaatcttg
gtcttaggagcaacaaacataccctgggttttagattctgctatcaggagaaggtttgag
aagcgtatttatattcctttacctgaagaccatgccagggcagcaatgttcaaacttcac
cttgggtcaactccaaatctcctaacagaatcagattatcgagagcttggaaagagaact
gatggctattctggtgcagatataagcatcattgtacgtgatgcactaatgcaacctgtt
agaaaagtgcaatcagctactcattttaaaaaagtaaaaggaccatcactgtctaatcca
aatacaatggtagatttgttcaccccttgctctccaggtgatcctgaagccatagaaatg
acatggatggaggttccaggtgacaaattactggagcctcaagtttccatgatcgatatg
ctcaggtcgctagctagcacaaaaccaacagttaatgaacaggacctggagaagttaaag
aagtttacagaagactttggtcaggaaggctaa
DBGET
integrated database retrieval system
