Falco cherrug (Saker falcon): 102054829
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Entry
102054829 CDS
T02911
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102054829 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fch04121
]
102054829 (TRIM54)
Ubiquitin system [BR:
fch04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102054829 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
TRIM_CC
RING_XB3-XBAT31
zf-RING_6
Sina_RING
CYP38_PsbQ-like
RHH_9
DUF5799
FlgN
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102054829
NCBI-ProteinID:
XP_014139502
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MNFAVGLKPLVAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQVRPP
RPXPMEGAGSGLTPGGATAXXXXXXXXXXRHEVVLDRHGVYGLQRNLLVENIIDIYKQES
ARPLHAKAEQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKS
ELSDGIAMLVAGNDRIQAIITQMEEICHTIEENGRRQKQHLGLRFDSLYSILEERKKELL
QSIAREQEAKLQRVRGLIRQYGDHLEASSKLVESAIQAMEEPQMAVYLQHSKELLKKIMD
MSKVSMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLGEDEADGPGDSNEATADED
RLDSLEAPEAMEDVGPRQKPASSPHGQH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtggggctgaagccgctggtggcggaggcacggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcctgtggtgatcctg
ccatgccagcacaacctctgccgcaaatgtgccaatgatgtcttccaggtgcgtccccct
cgaccctgacccatggagggtgctggatctgggctgaccccagggggtgccacagccgnn
nnnnnnnnnnnnnnnnnnnnnnnnnnccgccacgaggtggtgctggaccggcacggggtg
tacgggctgcagcggaacctgctggtggagaacatcatcgacatctacaagcaggagtcg
gccaggcccctgcacgccaaggccgagcagcacctcatgtgtgaggagcatgaggacgag
cggatcaacatctactgcctgcgctgcgaggcacccacctgctccctctgcaaggtcttc
ggggcgcacaaagactgcgaggttgcaccgctgcctgctgtctaccagcgccagaagagt
gagctcagcgatggcatcgccatgctggtggcagggaacgaccgcatccaggccatcatc
acgcagatggaggagatctgccacaccatcgaggagaatggccggcggcagaagcagcac
ctggggctgcgctttgactcgctgtacagcatcctggaggagcggaagaaggagctgctg
cagagcatcgcgcgggagcaggaggcaaagctgcagcgtgtgcggggtcttatccgccag
tacggtgaccacctggaggcctcctccaagctggtggagtcggccatccaggccatggag
gagcctcaaatggccgtgtacctgcagcactccaaggaactcctgaaaaagatcatggac
atgtccaaggtatcaatgagcagccgcccagagcctggctacgagaacatggaccacttc
tccatcaacgtggactatgtggcagagatgctgaggaccattgagttccagacagagcca
ctgggcgaggatgaggcagacggacctggggacagcaatgaggccacagcagatgaggac
cggctggacagcctggaggcacctgaagccatggaggatgtggggccgaggcagaagcca
gcaagctctccccatggtcagcactga
DBGET
integrated database retrieval system
