Falco cherrug (Saker falcon): 102055239
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Entry
102055239 CDS
T02911
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102055239 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fch01009
]
102055239 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fch04515
]
102055239 (PCDH1)
Protein phosphatases and associated proteins [BR:
fch01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102055239 (PCDH1)
Cell adhesion molecules [BR:
fch04515
]
Cadherins
Protocadherins
102055239 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
K319L-like_PKD
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
102055239
NCBI-ProteinID:
XP_014142630
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MHQGSGLEQSGPGGLGLPNLQCLCLLAAPLQRRMKQLASCMGLWLLLQLPALVSGTRVVY
KVQEEQPPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRE
CQHLLPGEPCFLEFEVSITDLILNSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTN
IGALFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQ
WDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQV
KANDSDQGANAEIEYSFHQASDMVRRLLRLDRATGLITVQGPIDREDVNILKFSVMAKDK
GANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDR
DEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSG
NPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAKLV
YSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINV
MDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQN
GTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNAT
YKHILPHTSPGQQVSKVKAEDIDSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILR
KHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDP
EYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQA
SKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSP
DLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYR
TNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLA
LPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSR
RPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKD
SPMEEIPLTQTSDFQPATTPSSQTTKREIYL
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagggaagtgggctggagcagagtggtcctgggggcctggggctgcctaacctc
cagtgtctgtgtctccttgcagctcccctgcagcgcaggatgaaacagctggcatcctgc
atgggcctgtggctcctcttgcagctccctgccctggtctctgggacacgtgtggtctac
aaagtgcaggaggagcaacctcccaacaccctcatagggagcctggcctccgactatggc
ttcccagatgtggggcacctctacaagctggaggtgggggccccgtacctacgtgtggac
ggcaaaactggggacatctacaccacagagacctccattgaccgggagagcttgcgtgag
tgccagcacctcctgcctggagagccctgcttcctggagtttgaagtgtccatcactgac
ctgatcttgaacagcagcccgcgcctgcttgagggtcagatagaggtgcttgatatcaat
gacaacacccccaactttgcctcacctgttctcaccctctccatccctgaaaacaccaac
attggggcactcttccccatccccttagccatggaccgggactcaggccccaacggtgtt
gcctcctatgagctgacggctggtccggaggcacaggagctctttggactgcaggtggcg
gaggatcaggatgagaagcagccgcaactgattgtcatggggaacctggaccgggagcag
tgggactcctatgatctgaccatcaaggtgcaggatggaggcaacccgccacgggcaagc
agcgccctgcttcgcatcaccatcctggacatgaacgacaatgcacctaagttcgagaag
gctctgtatgaagcggagctctctgaaaacagccctgtggggcactctgtccttcaggtg
aaagccaacgactcagaccagggtgccaacgctgaaattgagtactccttccaccaagcc
tcagacatggtgcgtcggctgctgcgcctggaccgcgccacggggctcatcactgtgcag
gggcccattgaccgtgaggacgtcaacatcctcaagttctctgtcatggccaaagacaag
ggggccaaccccaagagcgcccgtacccaggtggtggtcaccatcaaggacatgaatgac
aatgcaccctccatagagattcggggcattgggcttgtcacccaccaggatggcatggca
aacatctcggaggatgtgccagtagagacagcagtggctctggtgcaggtgtccgaccga
gatgaaggtgaaaatgctgtggtgacgtgtgtggtggctggtgacgtcccattccagctg
cggcaggctagtgaaacagggagtgacagcaagaagaaatacttcctacagaccaccacg
ccactggactacgagtcagtgaaggactacactattgagattgtagcagtggactcgggg
aacccgcccctctccagcaccaactctttgaaggtgcaggtggtggacgtgaatgacaat
gctcctgtcttcagccagagcttcaccgaggtggcattccctgagaacaatgagcctgat
gacctggtgatggaggtgagtgccagcgacgctgacagtggctccaatgccaagctagtt
tactccctggtgacggacccctcctccaagggctccttcaccattgaccctgactctggg
gagatccgggtgaaggccgtgctggaccgagagcagcgggagcgctatgagtttttggtg
gtggcggcagacaagggcagccccagcctcaagggcacagcatctgtggccatcaacgtc
atggacaggaatgacaatgaccccaagttcatgctgagtggctacaacttctcagtgatg
gagaacatgccgcccctcagccctgtgggcatggtgacggtgatcgatgctgacaaagga
gaaaacgcccgcattcagctgtcagtggaacaagacaatggggattttgtcatccaaaat
ggcactggcaccatcctctccagcatctcttttgaccgggagcagcagagcacatacact
ttccgactcaaggcagtagatggtggggatcctcccaggtctgcctatgtgggggtgacc
atcaacgtcttggatgagaatgataatgctcccttcatcacttcaccctccaatgctacc
tacaaacacatcctgccccacaccagccctggccagcaggtgagcaaggtcaaggcggag
gacattgactctggtgtcaatgcagagctgacctacagcatcacaggaggcaaccccttc
gagctcttccagatctccccgcacagtggagacatcaccctggagaaggagatcctgcgc
aagcaccatggcctgcaccgcttggtagtgcgtgtcaatgacaagggcaagccttcacgt
cacggcacagcactggtgcacttctatgtcaacgagacactggccaaccgcacactgctg
gacacactggtggggcacagcctggacacaccactcgacatagacattgccggagacccc
gaatatgagcgcagcaagcagcgaagcaacatcctctttggagtcatcgctggcattgtg
gccgtcaccctggtcatcgtgctggtcgtcctggtgcgctactgccggcagcgggaggcc
aagagcggctaccaggcaggcaagaaggagaccaaggacctgtatgcacccaagcaggcc
agcaagagcggtaagagcaagagcaaggtgaagaagagcaagtctccgaagccgcccaag
cccacggaggatgaggaggagacggggctgcagaaatcactcaagttcaacctcatgaat
gactctgtcagcgacagcccccgaatccacctgcccctcaactacccgccgggcagccca
gacctgggtcgccactaccgctccaactcaccgctgccctccatccagctgcagcctcag
tcgccctctgcctccaagaagcaccaagtggtgcaggacctgccagccactaacaccttt
gttggcaccggggacaacaactcaacgggctccgagcagtactcggactacagctaccgc
accaatccccagaaatacaccaataagcagttacctcatcgccgagtgacgttctctgca
gccagccaggctcaggacctgcaggatccctcccagcacagctactacgacagcgggctg
gaggaatcagagactccaagcagcaaatcatcatcagggccccgcatcgggccactagcc
ctgcctgaggatcactatgaacgcaccacgcccgatggcagcatcggggagatggagcac
cctgagaacgatctccggccgctgcccgatgtagccatgactgggacctgtacccgggag
tgcacagagttcggccactccgatacctgctggatgcccggccagtcctcccctagccgc
aggcccaagaacgccctcaaactctccacttttgtgccttaccaagacagagggagtcaa
gagcaagtcgggaatggcagccccagactctcagaagagcgcagcaccaaaatggccaac
ctccgcctgctccccacgtacagtgccttctccaatagtagccatgagccctgcaaggac
tctcccatggaggaaattcctctcacccagacctcggacttccagccagccaccaccccc
tcgtcccagaccaccaagagggagatttacctgtga
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