KEGG   Falco cherrug (Saker falcon): 102055405
Entry
102055405         CDS       T02911                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
fch  Falco cherrug (Saker falcon)
Pathway
fch03082  ATP-dependent chromatin remodeling
fch03083  Polycomb repressive complex
fch04110  Cell cycle
fch04330  Notch signaling pathway
fch04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:fch00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102055405 (HDAC1)
   03083 Polycomb repressive complex
    102055405 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    102055405 (HDAC1)
   04350 TGF-beta signaling pathway
    102055405 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102055405 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fch03036]
    102055405 (HDAC1)
Enzymes [BR:fch01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102055405 (HDAC1)
Chromosome and associated proteins [BR:fch03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     102055405 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     102055405 (HDAC1)
    BRAF-HDAC complex
     102055405 (HDAC1)
    REST complex
     102055405 (HDAC1)
    SHIP complex
     102055405 (HDAC1)
    MiDAC complex
     102055405 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102055405 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102055405 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    102055405 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl RNA_polI_A34
Other DBs
NCBI-GeneID: 102055405
NCBI-ProteinID: XP_014137447
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccacaggatccggatgacccacaacctactgctgaactatggcctctacagg
aagatggaaatatatcgccctcacaaggcaaatgcggaagagatgacaaagtaccacagt
gatgactacataaaatttctgagatctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagatttaatgttggggaagactgcccggtgtttgatgggttgtttgagttt
tgtcagctctccgctggaggctcagttgccagtgctgtgaagctgaacaagcagcagaca
gatattgctgtgaattgggcaggaggcctccaccatgctaagaagtcagaggcttctggc
ttctgttatgtcaacgatatcgtcttagctatcttggagctcctaaagtatcaccagaga
gtgctgtatattgacattgatattcaccacggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcataagtacggagaatacttcccaggaacaggg
gacctacgggatattggtgcaggcaaaggcaagtactatgctgtcaactaccctctccgg
gatggaattgatgatgagtcctatgaagcaatattcaagccggtgatatcgaaagtgatg
gagacgttccagcctagcgcagtcgtcttgcagtgcgggtcagattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctacacaatccgcaacgtggct
agatgctggacctatgagactgctgtggctttggacactgaaattcccaatgaactcccg
tataatgactattttgagtacttcggaccagacttcaagctccacatcagtccctcgaac
atgactaaccagaataccaatgagtatcttgagaagatcaagcagcgtctctttgagaac
ctgcgcatgctgcctcatgctcccggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagcggagatgaagaggaagaagatcctgagaaacgcatttcaatccgcaat
tctgataagagaatatcctgtgatgaagaattctctgactctgaagatgaaggggaagga
gggcgcaaaaatgttgccaactttaagaaagccaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcggaa
cccaaaggggtgaaggaagaaacgaaatccacctaa

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