Falco cherrug (Saker falcon): 102055496
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Entry
102055496 CDS
T02911
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102055496 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102055496 (CNOT6)
Enzymes [BR:
fch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102055496 (CNOT6)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102055496 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102055496 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
102055496
NCBI-ProteinID:
XP_005440682
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaattatgtcctcagaggaagcagctaacgggaagaaatcacactgggcagag
ttggaaataagtgggaaagtgagaagcttaagttcgtcattgtggacactgacccatttg
acagctttgcatctcagtgacaattccttatcccgtattccttcagacattgccaagctt
cacaatctggtatatctggacttgtcctctaacaaaattcgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
ttcgagctgggaaaactgttccagttacagactttgggtctgaaaggaaatccacttaca
caggatattctgaacctttatcaggaaccagatgggacacgaaggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaacggaacagccacctccaagatct
tggattatgttgcaagaaccagaccgtacaagaccaacagccttgttctctgtcatgtgt
tacaacgtactctgtgataaatatgctacacggcagctgtatggctattgtccatcttgg
gcattgaactgggaatacagaaaaaaagctattatgcaggaaatcctgagctgcaatgct
gacatcataagtcttcaggaggttgaaacggaacagtactacagttttttcctggtagaa
ttgaaagaacgtggctacaatggcttcttcagtccaaaatctagagctaggacaatgtca
gaacaggaaagaaaacatgttgatggttgtgcaatatttttcaaaacagaaaaatttact
ttggttcaaaaacatactgttgagttcaatcaactagctatggcaaactcggaaggttca
gaagctatgctgaacagagttatgacaaaagataacattggagttgctgtattattagaa
ctgcgaaaggaattgatagaaatgtcatctggaaagccacatcttgggatggaaaagcag
ctggttctcgtagctaatgcgcatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtccgaggtaaagaacattattgacaaagcttctcgtagt
ctcaaacctggtgtttcgggagaacttggaaccattccacttgtactgtgtgcagatctc
aattctctaccggactctggtgttgttgagtacctgagcactggtggagtggaaacaaac
cacaaagattttaaggaactgagatacaatgaaagtcttactaacttcagctgtaatgga
aagaatggaacaacaaatggaagaattacacatggtttcaagttgaagagtgcctatgag
aatggtctaatgccttatacaaattacacatttgacttcaagggtattattgactacatc
ttctactctaaacctcagctaaacatacttggcattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccacttatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaacggaatccatctc
cctggcaggaggtag
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