Falco cherrug (Saker falcon): 102055535
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Entry
102055535 CDS
T02911
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102055535 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102055535 (PAN2)
Enzymes [BR:
fch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102055535 (PAN2)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102055535 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
102055535 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
102055535
NCBI-ProteinID:
XP_005435820
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MNFEGLNPSLAEYAPPLHPALDPVLDPHLNPSLLQNVELDPEGVPLEGIAVPDSVHLMEG
MYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSNDDIR
QIQSLENGVLFLTKTNLKYMSRGGLIIFDYLMDESEDMHSLLLTDNSTLLVGGLQNHVIE
IDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLS
DFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRL
AIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADS
PEVTFNTYSRETDFALPCIVDTLPHLDWNQDLVPLSLIPVPLTSDTLLSDWPAANSAPAP
RRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKETDNEFDSFSQVPESPIGREE
EPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSGDSVIGQLFSCE
MENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENC
EKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQRAMMKRGGFEITKGKEI
SLGEWKELGNPDTGHSYPSVEELKNIWIPHAIKMRLTKSKELDVCNWSETDELSPTDDPE
SVYIYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKWW
RGQWWRLVAHLPSPFPAVKNPIEASVLLAEASLARKQRKCHATFIPLMLSEMPQAGDLVG
LDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVV
DYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVP
KDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSPQ
GAEPEDFRKVLKGLYEKGRKMDWKVPEPDSQSSPKHGAAGAHGGALPR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaggtctcaacccctcccttgctgagtatgcgccccccctccaccccgcg
ctggaccctgtcctggacccccatctcaaccccagcttgctgcagaacgtggagctggat
cctgagggggtgcctttagagggtatcgcggtgccggactctgtgcacctcatggagggc
atgtacagcgagctgcacaccgccgtctccgaagtgggagtgcctgtctctgtctcccat
tttgacctgcacgaagagatgctgtgggttgggaaccacgggggtcacgccacctctttc
tttggcccaacgctggagcgatactcctccttccaagtgaacagcaatgacgacatccgc
cagatccagagcctggagaacggtgtccttttcctgaccaaaaccaacctgaaatacatg
tcacggggaggcctcatcatttttgactacctcatggacgagtctgaggacatgcacagt
ctcctgctgacagacaacagcacgctgctcgttggtgggctgcagaaccatgtaatcgag
atagacctcaacaccgtccaggagacacagaagtataccgtggaggttcctggcatcacc
atcatgaggcaatcaaaccgcttctttttctgtgggcacacttcggggaaggtctctctg
cgcgatctgcgcacgtttgtggtagagcatgaatttgacgcgtactcgggcagcttgtct
gattttgatgtccacgggaacctgctggtgacctgcggcttctccagccgaatgaacggc
ctcgcctgtgaccgcttcctgaaggtgtacgacctgcgcatgatgcgggccaccaccccg
ctgcaggtccacatcgatcccttcttcctccgcttcatccccacctacacctcccgcctg
gccatcatctcccagacaggtcagtgccagttctgcgagcccaccggcctcgccaaccct
gctgacatcttccacgtgaacaccgttgggcccctgatcatgaccttcgacgtctccgcc
agcaaacaggcgctggcctttggtgactcggagggatgtgtccacctctgggctgactcc
cccgaggtcaccttcaacacctactcccgagagactgactttgccttgccctgcatcgtg
gacacgctgccccacttggactggaatcaggaccttgtaccactctcgcttatccccgtg
ccactgactagcgacaccctgctctccgactggcccgctgcaaactctgccccggcaccc
cggcgagcccctccggtagatcccgagattttgcgcaccatgaagaaagtggggttcatc
ggttacgccccaaacccaaggaccaagctccgcaaccagattccctatcggttaaaagag
acggacaatgagtttgacagcttcagccaagtccccgagtccccgatcgggcgggaagag
gagccacacctctacatggtggccaagaagtacaggaaggtcacgatcaaatactccaag
ctggggctggaagactttgacttcaagcattacaacaagacgctgtttgcgggcctggag
ccccatatcccaaacgcctactgcaactgcatgatccaggtgctatatttcttggagcca
gttcgctgccttgtccagaaccacctgtgccagaaggagttctgcctgggctgcgagctg
ggcttgctcttccacatgctggacctgtcccgaggagacccctgccagggaagcaacttt
ttgcgggctttccgtacaatcccagaggcttcagcgctggggctgatcctggctgactcg
gacgaagccacagggaaggtgaacctggggcggctgattcagagctggaaccgtttcatc
cttactcaactgcaccaggaaacccaggagcaggagggaccacaggcatatcggggggct
ggcagcagcagctttgggtcctcgggggactcggttatcgggcagctgttcagctgtgag
atggagaactgcagcatgtgtcgctgtggcaaggaaacggtccgcgtgtcctccacgctg
ctctttaccctctcctaccccgagagcactgaaaaaccagtcaaagattatgagtttgct
caaattttaaagcgaagcatctgcttggagcagaacacgcaagcctggtgtgagaactgt
gagaagtaccagcccacggtccagacccggaacatccgctgcctgccggacgtcctggtc
attaactgtgaggtgaacagctccaaggaggcagatttctggaagacacaggctgagtat
gcctttcagagagccatgatgaagagaggaggctttgagatcaccaaaggaaaagaaatc
tctcttggagagtggaaggagctggggaaccctgacacggggcattcgtatccttctgtg
gaggaactgaagaacatttggatccctcacgccatcaagatgaggctcaccaagagcaag
gagctcgatgtctgcaactggagtgagaccgatgagctgagcccaactgatgaccccgag
tccgtgtacatctacgatctcatggccactgttgtccacatcctggattcccgcacgggg
ggcagcctggtggggcacatcaaggtgggagagacctaccaccaacggaaggagggagtc
acacaccagcagtggtacctcttcaatgacttcctcatcgagccagtggataagtggtgg
cgtggccagtggtggcggctcgtggctcatctcccttccccttttcctgcagtcaagaac
cccatcgaagccagtgtgctgctggcggaggcctccctggctcgcaagcagcgcaagtgc
cacgccaccttcatccccctcatgttgagtgaaatgccgcaggcgggcgacctggtgggg
ctggacgccgagtttgtcacgctgaatgaggaggaggccgagctgcgcagtgacgggacc
aaatccaccatcaagcccagccagatgtcagtggccaggatcacgtgtgtgcgcgggcag
ggtcccaacgagggcatccccttcatcgatgactacatctccacccaagagcaggtggtg
gattacctgacccagtactcggggatcaagccgggagacctggatgccaagatctcctcc
aagcacctcactactctcaaatccacctacctgaaattgcgcttcctcatcgatgtggga
gtcaagttcgtgggccacgggctgcagaaggacttccgtgtcatcaacctgatggtgccc
aaagaccaggtgattgacactgtctacctgttccacatcccgaggaagaggatgatttcc
ctgcgcttcctcgcctggtacttcctggacctgaagatccagggggagacccacgatagc
atcgaggacgcgcgcacggcgctgcagctctaccgcaagtacctggagctgagcccgcag
ggcgccgagcccgaggatttccgcaaggtgctcaagggtctctacgagaagggacgcaag
atggactggaaggtgccggagcccgacagccagagcagccccaagcatggggccgctggg
gcgcacggtggggctctccccaggtaa
DBGET
integrated database retrieval system
