Falco cherrug (Saker falcon): 102055624
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Entry
102055624 CDS
T02911
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102055624 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102055624 (PARN)
Enzymes [BR:
fch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102055624 (PARN)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102055624 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
T6PP_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
102055624
NCBI-ProteinID:
XP_005444316
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDFLLFQFGLCTFKYDHTEEKYIMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGSLSYISPNATKCPVTIPEDQKKFI
EKIVEQIEDLLKNEENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIVI
SKVNEEERKRREQQKQAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTIHQFY
CPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKQLKT
QCTPYVSQSRYYCVNSFTGTSTVGKRSMSPIQEETGSDDMEEGESQSPEYDQTQSCAESL
PDGKKRAKKFKKIKTEQVPAGSLTTSSTGIFEVPETW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggattttctgctctttcagtttggcctttgcacttttaaatatgatcatacagaagaa
aagtatataatgaagtcatttaatttctatattttcccaaaaccctttaacagaagttca
ccagatgtcaaatttgtctgtcagagttcaagtatagattttttagcaaaccaaggattt
gattttaataaagtgtttcgcaatggaattccatatttaaatcaggaagaagaaagacag
ctaagggaacagtatgatgaaaaacgttctcaggccaatggtgcaggatctctgtcatac
atttctcctaatgccacaaagtgtcctgtaacaattcctgaagatcagaaaaaattcatt
gagaaaatagtggaacagatagaagacttactaaagaatgaagaaaatgaaagtttggaa
ctggagccgtgtacgggatttcagaggaaattaatttatcagaccttgagctggaagtat
ccaaaaggtatccatgttgaaactctggagtcagataagaaggagagatatattgttatt
agtaaggtaaatgaagaagaacggaaaagaagagaacagcagaaacaagcaaaagaacag
gaagaattgaacgatgcggtaggattttccagagtcattcatgctattgctaattctggc
aagcttgttattgggcacaatatgctgctggatgttatgcatactatacaccagttctat
tgtcccctacctgatgacctaagcgagttcaaggaagtaacatcatgtgtctttccccgg
ctattggatactaaactgatggcaagtacacaaccttttaaggagatcattaataataca
tcccttgcagaactagaaaagcgtttgaaagaggttccattcagccctcctaaagttgaa
agtgcagaagggtttccaagttatgatacagcttctgaacaacttcatgaagcaggatat
gatgcttacattactggactgtgcttcatctctatggctaatttcctaggttcattcctc
agtcctccgaaaaaccatgtgtctgctagatcaaaactcattgaacctttttttaacaag
ctatttcttatgagagtaatggacataccatatctcaatttggaaggaccagacttgcag
ccaaaacgagatcatgttcttcatgttacttttcccaaagagtggaagactagtgacctt
taccagcttttcagtgcctttggtaacattcaggtttcatggattgatgatacgtctgca
tttgtatcattgagccagccagaacaagtacaaatagctgtaaacaccagcagatatgct
gaaagttataggatccagacatatgcagaatatgttgagaaaaaacatgaagaaaaacag
gcaaagagaaaatgtacagaagatagttggaaggagatggagagaaagcagttaaaaact
caatgcacaccttatgtttcccagagtcgatactactgtgttaacagttttacaggtacc
agtacagtgggaaagagaagcatgagtcctattcaggaggaaactggttctgatgatatg
gaagagggagaaagccaaagtccagaatatgatcagactcagtcctgtgcagagtccttg
ccagatggtaaaaagagagccaaaaagttcaaaaagatcaagacagaacaagttccagca
ggaagcctcacaactagttccactggaatttttgaagtccctgaaacatggtag
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integrated database retrieval system
