Falco cherrug (Saker falcon): 102056041
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Entry
102056041 CDS
T02911
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04140
Autophagy - animal
fch04148
Efferocytosis
fch05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102056041 (VPS18)
04148 Efferocytosis
102056041 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102056041 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fch04131
]
102056041 (VPS18)
Membrane trafficking [BR:
fch04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102056041 (VPS18)
Hops complex
102056041 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
Lact-deh-memb
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
DUF2229
Nup54_57_C
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
102056041
NCBI-ProteinID:
XP_027660488
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MAGYVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPN
QVELGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALSRWKGHLIESVGWN
KFLGSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCL
EIERGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHLPSFREFPANLGFS
EIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPSDIDIAVNKPISI
VLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDPTVQQIWIHTEKVVFR
YHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYIDSAKCYAL
TQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILEG
DPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYER
VVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIP
ALVNYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGT
NPNRIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDD
EELRKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNS
LEDYNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLF
LCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGKGQQ
SREQIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatatgtaaatgcacgactggagaaggaaacgccgatatttaacaagcaaagg
attgattttgctcctccagagaaaatcaacagcttagtggtctcctctaaccagctctgc
atgagccttggcaaagacacccttctcaggattgatcttgggaagcctgatgaacctaat
caggtagagctgggacgcaaagatgaagccaaagtctacaagatgtttttggaccacaca
ggctctcatctcctgattgccctgaacaccagtgaatgcctttacctgaacagaagtgtt
cagaaagtacgagcactctcccgctggaaaggtcacttgattgaaagtgtgggctggaat
aaatttcttggttcggagaccaacactgggcctatcctggtggggacagcccaggggcag
atctatgaggctgaaatctctgtcagcgagggaagcctcttcagcactaatcctgaccag
tacttccgacaggtctacactctggaggaggagtcaggacctgccccagtctgctgcttg
gagattgaaagagggatagaagggaaattttttattatagccaccactcgaaagagactc
ttccagtttgttggcaaagtgcctgaagggacagaacagcaaggcttcagctccatattt
gctatgcatgctgaccatttgcccagcttccgggaattcccagccaacctaggtttcagt
gagatagccttttacaccccaaaactgcgctccaacccacgctcctttgcctggatgatg
ggaaatggtgttttatatggtacattggattatagccgtcctgactcaattttgagtgat
gaacgggtctgggtttatccttctgatattgacatagctgtgaacaagccaatatccatt
gtacttacccagttccacttcctgttgctgctacctgatcgggtgaaagctgtatgcact
ctgaacgggcaggttgtttttcaagatctgttcctagagaagtttggcttgttgacgcgc
atgatcaaagatcccacagtccagcagatatggatccacactgagaaagtagtgttccgc
taccatgtccagcgggaatctagagacgtatggaagatgtatatgaatatgaacaagttt
gatttagccaaagagtattgcaaagaccgtccggagtgcctagatatcgtgctggcaaaa
gaggcagagcactgcttccagaacaagaggtatatagacagtgccaaatgttacgcactg
acgcagaactactttgaggagattgccctgaagttcattgaagccaagcaagaagaggcc
ctgatggagtttctgattaagaagctaagtaacctaaagccatctgagaagacacagacc
actctgctgaccacgtggttaacagagctgtacctgaactggctaggtatattggaagga
gatccctcacagcgaaatctctatttggatactcgggagaagtttcgcactttcctgagc
agtcctaaaaacaaggactgtctatttaataaccgagcatctatttatgagctgttggct
agccatggggacaccgagcacatggtctactttgcagtcatcatgcaggactatgagcgt
gtagtagctcaccactgccagcatgacgagtatgatgaggccctaaatgtgctgtccagg
cacagagacgagaagctgttctacaagttctctccagtccttatccagcatattcccaag
aaggtagttgatgcttggatttctatgggctctagactggatgcccggaacctcattcca
gcccttgttaactatagccagagtgccagcacccagcagatcaatgaagccattagatac
atggagttctgtgtctatcagttggaggaaacccagcaagccattcacaactacttgttg
tctctttatgctttgtgtcggccggactcgctgttgtcatacctggagcaagcaggaacc
aacccgaataggatccactatgacctgaagtatgcgttgcgcctgtgcgcagagcatggg
caccaccacgcgtgtgtccacatttacaaagtgatggaattatacgaggaggctgtagat
cttgccttacaggtggatgttgatcttgcaaagtcctgtgcagatctccctgaggatgat
gaggaactccggaagaagctctggttgaagattgctcgccacgttgttcaggaagagaag
gatgtcaagaaggcaatggcctgcctttccagctgtgccctactgaagattgaagatgtc
ctgccgttcttcccagactttgtcactattgaccatttcaaggaggcaatctgtaactcc
ctagaggactacaacaagcacattgaggaattgaaaagggagatggaggaagccacacag
agtgccaaaagaatcagagaggacatccaggaaatgagaaataagtatggctctgtggag
cctcaggaaaaatgtgctgcttgtgactttccacttctaaaccgccctttttaccttttc
ctgtgtggtcacatgtttcactatgactgtctcctccaggccgttttcccaaaccttcct
gcctataagcaggcaaaacttgaagatcttcagaagaagttggcagctaccagtcagcct
tccaagagccaccatcgtcccaaggatgcagataccattagcttggggaaggggcagcag
agccgggaacagatcaaagctgacattgatgatattgtggcagccgagtgtgtgtactgt
ggtgagctgatgatccggtccattgataagccttttattgatccccaaaagtatgaagag
gagatgcaaagctggctgtag
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integrated database retrieval system
