Falco cherrug (Saker falcon): 102056386
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Entry
102056386 CDS
T02911
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102056386 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102056386 (EDC4)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102056386 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
102056386 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
NBCH_WD40
WDR55
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
102056386
NCBI-ProteinID:
XP_027662677
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MKFQFSKPVKISSEDFVETRGFDFTVLMYVVHSWPCFSLGSVNENRRPSNSYNGDLNGLL
VPDPIAAGDGPSLAKPAHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSI
TSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSISTAE
RTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPENTP
LNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWDLDLIRTNNSSWPVEVPSIKE
GFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPL
SCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILP
SLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVS
RCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHS
PDMSASMPSHGSHEEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLS
NDAKPKLMTPDAFMTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVADASMPRPSEDLTVS
PKMQLDTSLTLSSSSSSLQTSPRSHSVIIPGLPDKLTPKAPVPVTPGNPSLALELQEVEP
LVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPSHHADS
MASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQP
WPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVAS
LASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEF
QDELMCILRSQQRELSDLRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLD
RALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPVAGQL
SNTIAAKLTTVEGTLKESITKLVKSKNLTDTVVRATADTLQGPIQSAYKEAFQSVVLPAF
EKSCQSMFQQINDTFKQGTQEYIQQLETHLKNRKVREQEARDPLLNQLRQLITTFQSTTE
QLASTVAASVHAEVQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAM
RSAAGTPIPSAHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVF
GQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVR
QKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcagttttcaaaaccagtgaaaatttcaagcgaggattttgttgagacacga
ggctttgacttcactgtgctgatgtatgttgtgcacagttggccatgcttttccctaggt
tcggtgaatgagaaccggagaccgtcaaattcctataacggagacctgaatggactgctg
gtgcctgatcccattgcagctggagatggaccttctttggctaagccggcgcatcgcagc
atttctctgggagccctgcaggagaaacaagtcatctgcctttcaggtgatgacagctcc
acttgcatagtgatatcagcaaaagatgtggagatagtggccagcagtgattccagcatc
accagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatatgactgg
gagcagaaatattattatggcaatctgatagctgtttcaaactcttacctggcttatgcc
attagagctgccagtaatggctccgctatggtgcgggtgttgagcatcagcactgctgag
cggaccttgctgaaaggattcacaggtggtgtggcagacctggcttttgctcatctcaac
tccaaccagctggcatgcctggatgaggctggcaacctttttgtctggcgcctggccatg
gataaagaaaagatccaagaggagatcttggttaacatcaagcgacctgagaatacaccc
ttgaacacctctcgacgaatcatctggtgccctttcattccggatgataatgaggagagt
ggtgaagagggaagtcagacgttggcattgttgcatgaggacagggcagaggtgtgggat
ttggaccttatccgaacgaacaacagctcctggccggtggaggtgcctagcatcaaagaa
ggcttcatcgtagtgaaaggccacagcacgtgcctcagtgagggagcactttctccggat
ggaactgtgttggccacagcaagtcatgatggttttgtcaaattctggcagatctatatt
gaggggcaagatgagccaaggtgtcttcatgagtggaaaccccatgatggtaggcctctt
tcctgcctgctgttttgtgacaaccataaaaaacaagacccagaggttcccttctggaga
tttctcattacaggagcagatcagaacagagaactgaagatgtggtgcactgtgtcttgg
acctgtctgcaaactgtccgcttttctcctgacatcttcagctccatgagtattcttccc
agcctgaaagtctgcctggatctctctgctgaatatctgatactgagcgatgtccagaga
aaagttttgtatgtgatggagctgatgcagaaccaagaggagggcaaggcttacttcagc
tccatctcagagttcctcctcacccacccagtcctcagctttggcatccaggcagtgagc
cgctgtcggttaaggcacactgaagtgctcccagcagaagaggaaaatgacaacttgagt
gtggaaggtgctcagggagctggggctgttgaatcagcagcaggcgtgctgataaaactc
ttctgtgtgcacaccaaagccctacaggatgtgcagattagattccagcctcttcatagc
cctgacatgagtgcctccatgccttcccatggctctcatgaggagtttgcctttccagac
cacatggctgatctgagcacagaagggctgggatctgaaaaaggatcggtgcatggctct
caaccagacctgcggcgcattgctgatctgcctgtaccagcagacttcctttctctctca
aatgatgccaaacctaagctgatgactccagatgcattcatgacaccaagtacatctctt
caacagatcgctgtatctccaggcagcagtgttagttccctgactgcagtcacagccatg
agtagcacttctgtcgcagatgcctccatgcccaggccatcagaagacttgaccgtgagc
cccaagatgcagctagacaccagcctcacgctgagtagcagcagcagcagcctccaaact
agtcctaggagccattcagttattatcccaggcctccccgacaagctaacaccaaaggcg
cctgttccagtcacaccaggaaacccctctttagcactggaactgcaggaggtggagccc
ttggtggtcccccaggcgtctcccacccgtgagcgctcgccagacgtcatttcctctgct
tccacagctatgtcccaagatatcccagagattgcttccgagaccttgcaacgtagcttt
gcagcagctccgtctgggctccctgcagaggtgctggagcccagtcaccatgcagacagt
atggcatctgctgcctcagccttgcatttgctgtctccgaggaaccggcacaattcagag
cacagccaccactctttggacatgcctccagtggaggtggacagactgaatgctccatcg
ttactggagactgctttaactcaggaaaatgcatcttctgacagtgttgtgagtcagcca
tggccagcagctcctgacataaccagagaaactaggaacagcatggcagacagcccaagg
gatgaagttgaagaaaagcacaagagctcttcctatcatcgacacagctaccacctgctg
cagcatgacagccaggatgctagtgcagaacaaagtgatcatgatgatgaagtcgcaagc
ttggcttctacgtcaggcggatttggtgccaaagcgtctacgcagaggctgcctgtgaag
gactggaaagccaaggcatcaccccgggcttccccaaaactaaagcggaagggcaagaaa
gatgacggggatgtgaaccagtcaccaagatcatctaacaaccaggtgacaccagagttc
caggacgagctgatgtgcatattgaggagccaacagcgggagctctctgacctgcgtcag
aaccagatggagctgctgcagagactcacggatcaccttgatgctattcagagctccctt
atgggccacgtggagagggtgattgactcccagcaggagcaggagcagagaagactagac
cgagcactgacagaaggacagcagcgcaatgggcagctccaggagcatctgtctcagcag
ctctctcagtccctttccactgctgtgtgcaaccgcctggagaggaccattcgcgaggag
atgaagaagaccgtaccccagtgcatttccaagagcatggaccctgtcgctggccagcta
agtaacactattgctgccaagctcacgactgttgaggggaccctgaaagaaagtatcacc
aagctagtgaaatcaaagaaccttacagataccgtggtgagggcaacagccgataccctg
caggggccgatccagtcagcttacaaggaagcgtttcagagcgttgtgttgccagccttc
gagaagagctgccagtccatgtttcagcaaatcaatgacacctttaagcagggcacacag
gaatatatccagcagcttgagactcacttgaagaacaggaaggtacgagagcaggaggcc
cgggacccgctgctgaaccaactccgacagctcatcaccaccttccagagcaccacggag
cagttggcttccactgtcgcagccagcgtccatgctgaggtgcagcatcagctgcatatt
atcgtgggcaacatgcaggagtctattttggcccaggtgcagagagtcattaaaggagaa
gtgagcctggctatgaaggagcagcaggcagctgtcacctcaagcatcgtccaggcaatg
cgctcagcagccgggactccgatcccctctgctcacttggatttccagtctcagcagact
cacatccttcagctgctccagcagggacacctcaaccaagctttccagcaggctctaaca
gcggctgacctcaacttggttttgtacgtctgtgagactgtggatactcagcaagtattt
ggccagcatccatgcccactgtcccagcctgtgctgctctctctcattcagcagctctcc
tcggatttgggtactcgtacagaactgaagttgaattacttggaggaagcagtgatgcac
ctggaccacagtgaccccatcacccgagaccacatggggtcggtcatgaaccaggtgcgg
cagaagctcttccagttcctccaggtggaaccccacaacacgctgagcaagcctgcccgt
cgtctcatgatcatgcttcagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
