Falco cherrug (Saker falcon): 102057474
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Entry
102057474 CDS
T02911
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03440
Homologous recombination
fch03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102057474 (BRIP1)
03460 Fanconi anemia pathway
102057474 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fch03400
]
102057474 (BRIP1)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102057474 (BRIP1)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102057474 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102057474 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
102057474
NCBI-ProteinID:
XP_027661986
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MSSDVSEYTIGGVKIIFPCKAYPSQLAMMNAIIKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSQLMSSSEKEDRKPETSPPCRCTCHSQSKSNEAATSVNNGASCSFNNYEM
GSSIKPGSPLTNTECKENETLASKLSVKKKLSQCDNENDDFQADRKRIRPLETEQQQVRK
RHCFAKGVQLVDALNVHNQRNNGELIAQSEKSVKTTTFSAKTSSGPCTECSCSSGKETGK
DTSNAKKKENGDRSFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPV
VSSSGSNRNEMCVELLEGKHGKSCPYYHGVRKLSEHNALQLAHGMYQAWDIEDLVSLGKK
LRACAYFAARELMVGADIIFCPYNYLLDPQIRESMEINLKDQVVILDEAHNIEDCARESV
SYGVTERQLRAAREELDFMVNNNIRQKAHEPLRAVCCSLTNWLQKSSSQLVERGYETACK
VWSGREMLTNLHEMGITGITFPILQKHLATVLEKEEKVSVLGKEELIEIPVVSPATQIVL
KGLFMVLLCLFKDNSRYADDYRVALQQTYAWMEENQLDVSDTGAFFARPKRKRSLRQKTE
VHMLNFWCLNPAVAFSDLRGVRTIVLTSGTLSPMDSFSSELGLKFSIQLEANHIIRNSQV
WVGTVGAGPNGRKLCATFQHAETFEFQDEVGALLLSVCQTVGQGVLCFLPSYKLLDKLKD
RWMHTGLWRNLELIKTVIAEPQGGAKSDFDELLNIYYDAIRCKGEKDGALLIAVCRGKVS
EGLDFCDANARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALN
QALGRCIRHRNDWGALILVDDRFRSNPNKYITGLSKWIRQQIQHHENFGSALESLHAFAI
RNQKNIDSSSQCSSEFLHVPSNSKDLSQASQLEATIHLSPDVPAKSEEQNLVSEINFTTT
ISSVNPAASNQPSNVRATMKRSGQKADVESHSCHVTQKRKHLDSTPKRPATKLEREKKNG
RTNDDDMKEHCCFQPLTSTPLPVAKNSTSPASSEQENVNMAGELIDSVNQCPSAFVSERK
RVPESCFETTNFSVKDTEAPVAEEHPDELQLQDEPCSKFPSAGGKSELSMLNISGEAEDE
DESIYYTPELYDDVESEEQKIKPLVQTCNMNENQIECGNSTVADDFFAVNTSETQSVTKK
IDDDDGRGMSLHGIMQNECSKNSAVHNVEMTHEIEAQQVASQEVDTKKRKINLSRSRNKE
GNPPPALQERTLLYCLWS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactattgggggagtgaagatcatattcccttgtaag
gcttacccttcacaacttgctatgatgaatgctattattaagggcttaaataacaggcaa
cactgtttattggagagccctacaggcagtggcaaaagtttggcattactttgttctgca
ttatcatggcagcagtctctatatgagaaatcacagcttatgtcgtcgagtgaaaaggaa
gacagaaagccagagacctcaccaccgtgtcgctgcacgtgtcattcccaatctaagagc
aatgaggctgcaacaagtgtaaataatggtgcttcttgttcttttaataattatgaaatg
ggaagttccataaaacctggaagcccgctaacaaacacagaatgtaaggaaaatgaaacg
ctagcttcgaaattgtctgtcaaaaaaaagttatctcaatgtgacaatgagaatgatgat
tttcaagcagacaggaaaaggattcgtcctttagaaactgagcagcagcaggttagaaaa
cgtcattgttttgcaaaaggagtgcagctagttgatgctttaaacgttcataatcagaga
aataatggagagctgattgctcaatctgaaaaaagtgtgaaaaccactaccttttctgcc
aaaacatcttctggaccttgcactgagtgttcctgttcttctggaaaagaaactggtaaa
gatactagtaatgcaaagaagaaagaaaatggagatcggtcattcattcccaaaatattt
tttggaacacgaacacacaagcaaatatcccagattactagagagctgaagagaacagcg
tattccagtgttcctatgacaattctttctagccgggattatacctgtattcatccagtg
gtatctagtagtggtagtaacaggaacgaaatgtgtgtggaattgctggaaggaaaacat
ggcaagtcctgtccttactatcatggtgttcgtaaactcagtgaacacaatgccctgcag
ttagcacatgggatgtatcaagcttgggacattgaagatctagtgagcctgggaaaaaag
cttcgtgcctgtgcgtattttgcagccagagaactcatggtgggcgcagatattatattt
tgtccttataattatcttctcgacccacagatacgagagagtatggaaattaacctaaaa
gaccaagtagtcattttagacgaagcccataatattgaggactgtgctcgggagtcagtg
agctatggtgttacagaaagacaactaagagctgctcgcgaagagctggatttcatggtc
aataacaacatcagacagaaggctcatgagcccctgcgggctgtgtgctgctctttgaca
aactggttacagaagagctctagtcagctcgtagaaagagggtatgaaactgcctgtaag
gtttggagtggaagagaaatgctcaccaatttgcatgaaatgggaataactggtattact
tttcccattttacagaagcatcttgctacagtcctggaaaaagaagaaaaagtatcagtg
ctcggtaaagaggaacttattgagataccagttgtgagccctgcaactcagattgtgctg
aaagggttattcatggttcttttgtgtctttttaaagataatagcaggtatgcagatgac
tacagagttgctttacaacaaacttatgcttggatggaggaaaaccaacttgatgtttca
gatacaggtgccttctttgcacggcccaagcgtaaaaggagtttgcggcagaaaactgaa
gtccacatgcttaatttctggtgcttgaatcctgccgtggctttttcagacctacgaggt
gttagaacaattgttctgacatctggtacactttctccgatggattcattttcttcagag
cttggcttgaagttttctattcagttggaggcaaatcacattattcggaactcacaggtt
tgggttggcactgttggagcaggccctaacggtcggaagttgtgtgccacgttccagcat
gcagagacctttgagttccaagacgaggtgggagcactgctgctttcagtgtgtcagaca
gttggccaaggtgttttgtgctttttgccatcctataagctgttggacaaattaaaagat
cgctggatgcacactggcttatggagaaacctagagctgattaagacggtcattgccgag
cctcaaggaggggcaaagagtgactttgatgaactactgaatatatactatgatgcgata
agatgtaaaggagaaaaagatggagcactccttatagctgtatgcagaggaaaagttagc
gaaggcttggatttctgtgatgcgaatgcccgtgcggttataaccataggtattccgttt
ccaaatgtgaaagaccttcaggttgaattaaagaggaagtacaatgaccagcacaaaaat
acaagaggccttttaccagggagtcagtggtatgaaattcaagcttatagggctctgaac
caagccctgggaaggtgtataagacatagaaatgactggggtgctcttattttagttgat
gaccgcttccggagtaaccctaataagtacataactggattatctaaatggattcgtcaa
caaatccaacaccatgaaaactttggtagtgcacttgaatccttgcatgcgtttgctata
agaaaccagaaaaacattgatagttcatcacagtgcagcagtgaatttctccatgtgcct
tcaaattcaaaagacctgtcacaagcctctcagctggaggcaactattcatctgtcgcca
gatgttcctgctaaaagtgaagagcaaaatttggtttcagaaattaattttactacaacc
atcagctcagttaatcctgcagcatcaaatcagccaagtaacgtcagggcaaccatgaaa
cgaagtggccagaaagctgatgtggagagtcattcttgccatgtaacacaaaaaagaaaa
catttggactccacacccaaaaggccagcaactaaattagagagagagaaaaagaatggc
cggactaatgatgatgatatgaaagaacattgctgctttcaaccactgacttcaacgccc
ttgcctgtagccaagaacagcacgtccccagctagtagtgaacaagagaatgtgaatatg
gccggtgaacttatcgatagtgtaaatcagtgcccgtcagcatttgtttcagaacgtaaa
cgtgtaccagaatcatgtttcgaaacaactaatttttcagttaaagatactgaggctcca
gttgctgaagagcatcctgatgagctacagcttcaagatgagccctgcagtaagtttcct
tcagcaggagggaaatctgaactttcaatgttaaacatatctggagaagctgaagatgag
gatgagagtatctactacacaccagaactctatgatgatgtagaatcagaggagcagaaa
atcaaaccactggttcaaacctgtaatatgaatgagaatcagattgaatgtgggaactcc
acagttgctgatgatttttttgcagtcaacacctcggaaacacaaagtgtgactaaaaaa
atagatgatgatgatggcagaggcatgagtttacatggaataatgcaaaatgagtgtagt
aagaatagtgcagttcataatgtagagatgactcatgaaatagaagcacagcaggtagca
tctcaagaggtggacaccaaaaaacggaaaatcaatctttccagatcacgaaataaagaa
ggaaacccaccaccagccttgcaggaaaggactttattgtattgtctgtggagctga
DBGET
integrated database retrieval system
