Falco cherrug (Saker falcon): 102058000
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Entry
102058000 CDS
T02911
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fch04121
]
102058000 (PDZRN4)
Enzymes [BR:
fch01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102058000 (PDZRN4)
Ubiquitin system [BR:
fch04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102058000 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102058000
NCBI-ProteinID:
XP_014139418
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MLHRENDTLGFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKD
LSKATHEEAVEAFRNAKEPIVVQVLRRAPISKAHGSSQDVRLVDASTQTDITFEHIMALA
KLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPGDADRTEDFEYEEVELCR
ISSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDIQNREEA
VALLSSEECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVE
QPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSATLQSKRE
LGHSQDTLESVELQCNGSFVSGEYIESDFVGNPEEECERFRQLLELKCKIRNHGEYDLYY
SSSMIECNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGF
RNYNTSVDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMITIT
NRKNLRSTIVANQSSSGQSSRETTSAKTKPTEQSSAAENAELASESGRFTDQEKQSSEHI
PYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKM
EWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERK
QHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNW
MTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgctacaccgagaaaatgatactttgggattcaatattataggaggacggcccaatcag
aacaatcaggaggaatctgctgagggaatttatgtgtcaaagattctggagaacggacct
gcagacaaagcagaaggcctgcaaattcatgacaagattattgaggtcaatgggaaggac
ctctccaaggccactcatgaagaggcagtggaagcttttcgcaatgccaaggagccaatt
gtagttcaggttttacgacgagccccaattagcaaagctcatggcagctctcaggatgtt
cggcttgtggatgccagcactcagactgacatcactttcgagcacattatggctctggcc
aaactaaggccttccacaccgccagttcctgatatctgtccttttctactttcagacagc
tgccattctcttcacccagtggagcatgaattttatgaaggtaatgagtatctttccagc
ctgcctggtgatgcagatagaacagaggactttgagtatgaggaggtggagctgtgccgc
attagcagccaggagaagctgggtctgactgtctgctacagaactgacgatgaggaagac
acagggatctatgtcagcgaggttgatccaaacagcatagctgccagagatggacggatc
cgtgaaggagaccgcattttgcaaataaatggccaagatatccagaatcgggaagaagca
gtggcattgctctccagcgaagaatgcaagaaaattgtgttgctggttgcaagaccagag
atgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagaggagttaaac
ttggaaatgttggaagagcagcataatgaagcgatgcagtacacagccaatgaggtggag
cagccaaagaaacatgaagaggaggatggcactacagacactgcaacctcatcatccaac
aatcacgagaaagacagtggggtgggacctacagatgaaagtctgcgtaatgacgagagc
tcagagcaagaaaatgcacctgaggagcagaacagcgctaccctgcagagcaaacgggag
ctgggccacagccaagatacattagaaagcgttgagctccagtgcaatggaagttttgtg
tctggggaatacattgaatctgatttcgtaggaaacccagaggaggaatgtgaaaggttt
cggcagctgttggaactgaagtgcaagattcggaaccacggggagtatgacctgtattac
tcaagcagcatgatagagtgcaacagaagagagcaagatggagtggagcatgagctgcag
ctactcaatgaagaactgaggaacattgaactcgaatgtcagaatattatgcaagctcac
aggctccaaaaggtgagggatcagtacggagacatttgggctttacatgatgaagggttc
aggaattataacaccagcgtagatgtacaaagaggcaaactggatgacatcatggagcac
cctgagaagtctgacaaggacagctccagcgcctacaacacggccgaaagttgcaggagc
actccactgacagtggagcgatcccctgataactctctccagaggatgatcaccataacc
aacaggaaaaacttgaggagcacaatcgtggctaatcagtcatcctcaggacaaagcagc
agggagacaacctcagccaaaaccaaacccactgagcaaagcagtgctgctgagaatgca
gagctggcatcagaaagtggcagattcacagaccaggaaaagcagagcagtgagcacatt
ccctacctgtctccatatcacagctcttcttacaggtatgggaatatacctgctcatgca
aagcattatcaaagctatatgcaactgatccagcagaagtctgcagtggagtacgcccaa
agccagctcagcctggtgagcatgtgcaaagactcgcagaagtgtgcagagcccaagatg
gaatggaaggtgaaaataaggagtgatgggacgaggtacatcacaaagagaccagttcga
gacagaatcctgaaggaacgtgccttaaaaattaaagaggagcgcagtgggatgacgaca
gatgatgatacaatgagtgagatgaagatgggtcgctactggagcaaagaagagcggaag
cagcatttggtgcgagctaaggagcagaggaggcggcgggagttcatgatgaggagcagg
ctggagtgtcttaaggaaagcccacagagtggcagtgagggcaaaaaggaaatcaacatt
attgaactgagtcacaaaaagatgatgaaaaagagaaacaagaaaatcttggacaactgg
atgacaatccaagaactgatgactcatggtgctaaatctccagatggcacaagagtgcat
aatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
