Falco cherrug (Saker falcon): 102058163
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Entry
102058163 CDS
T02911
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fch03021
]
102058163 (SETX)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102058163 (SETX)
5.6.2.5 RNA 5'-3' helicase
102058163 (SETX)
Transcription machinery [BR:
fch03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102058163 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
Phage_tail_terminator_8
DUF4164
Motif
Other DBs
NCBI-GeneID:
102058163
NCBI-ProteinID:
XP_027665371
LinkDB
All DBs
Position
Unknown
AA seq
2810 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKQLPLEDFEGSNDDLCYCLECVVEYHKAREKLPRLHE
VLWKLETSRLVAHIEKSMREEDGEDDELFIVDENGETPLSGYVGPDFENNLRVPLVEILK
YPYLLLHDKVSELCVEVLCRMEQSHNSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFENPDIYGSSMIEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEAEAADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSESYNNEIKNIRSSFKRTKSEPEWDYDDDTVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHHSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKNILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHCVRGSSAVSLQASNSVQHACVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQICLKQVIRSIKGRALNTS
VAAGNNANSTNLPTVSIKQEKSAGGDRCRMSVRGRGDLCSPFAVMSKEGGDEDCQENLFP
TGKSTCEEECRDASESSSSWTSTEGLLNIKKEVNDWTTQEYICPQNALAARVCGNFQEDG
NNDLVGGKCNKDNECFNPSAQHSDFRRGGELENKSEAEPTTPTCLAAQTHIGSPEHVHSS
DLKESNMSPSSSLKFKVDVPRLMDLKNKIQKTECPSKVLQLVKPYKLKNCSLATSASKGE
AKQPVFCTDYQCTSKDCHKHQGQSTVCENETSVNTPSSRCCESTQKKSVNSAFQSRLFPT
KQIPKETPKDCSVSSKNEPGMQENEDGNDLLSGINDTLLKKESTDEKPSSLLKSVFKKDT
DMQTSDREQPDLNDSVKYDSKSQISKIICMDKTSANSHVPSTSEKKRDMSSPAAQIRPLS
VKCESSDRLFNFSEYFKRENNAVGKKEEDFMKTVSEDNTLTDSQVDKELSKLSLTAYAKS
VNFPFDSSQESAVHHNVCDIKRKVKGAVRSSSDGQNTKSPCDVDCPDNQVIIISDSSDEG
GVPNKKETKKIDEDVCPEKQPSTSSCISNSDSKIESKMPGALMSLEECESQYFEFETEYD
VFSVWQDTQAYSMEETQEYKQGCVSTEVDSTSSDDFLNDCTNQWGYDVDYISDNTTEEAA
TDLAEKQIENVSHQIKSDNTNEVTNSALQESVSKGNAKDELEGFADKDTVAKDFTLDSEL
TQPRASTSSISLASKLALKKNSASPRKNIAKSEVARTVQRSPKASPVFKTAQNKKLLQSI
PKNSQPARSMPAVVPPRKVRQCPAPTSTVEKLGLKKAPRKAFDLSQRSLESLAQLRSYGK
AAGRVGVAQKQKVKLIAPRSLSIKHNKKMLACQDLQFLRQTRPPKSARVKNLAGSSESRN
RKVSKVVVKTMKQKPKTFEWASVEGSVENQREEKRKEADSSSASERIFESLCVEEKTCLS
QMPNSSGSNRKSEDNSMRVPPVPMDSSLFSVARVGDDKDEPPGGCCIVQPKCEKTTSKEN
GCKLNENSEDDDDLFLTQSDPVDMELCSKEESVQVNVEVGNKPEETGTAESLQQNESLTI
VKCKYKDCVEKVEKPVEYCSKHSATSSEADHLFAKPFFMPPSKTRKPSTTKIFSSASSSR
NAAFSKDLEDIKKLPPASKSKVNAAKPVVVRPPNAKGIPVGNQTCKSSSFSNVSQPRISN
VLQSGNRQNDNASNISRRPAQEPYYSSFLGTQQRDHSIFVNEVLKWTYDMFMNLSQFGPP
STLLQSVVASVPVRFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREEKSYYFYLQNF
YADLNTAEFTAHFQESDLARQLNPKEDDLVFLVVQKEKDSFREESEVENHMVHHVGLVTR
FGRASGCLTRQKEQHTICHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRKFRGLLLLNRS
PLLKPILNPSYSDFCPRDLPVASGSAVLDLNEYNEDQKRAIETAYAMVKQHPVLPKICLI
HGPPGTGKSKTIVGLLSLVLRENTRNEKTTKKTNSKIKPNRFLVCAPSNAAVDELMKKII
IAFKEKCQNRQEPLGNCGDIKLVRLGAEKAINNEVRRFSLVKQVEHRMKRQPFDCDQDIQ
KKKAALDQKLDMLSRQRAMHRCEKRESQILDDEIGRLSKERQQLASQLKEVRGHSQKVQA
DIILEADIICCTLSTSGGNLLESAFSRLGVDPFSCVIVDEAGQSCEVETLIPLIHRCNKL
VLVGDPRQLPPTVKSVKAQDYGYDQSLMARLQRHFEEQVRKNVLQSLPVVQLTVQYRMHP
DICLFPSNYVYGRALKTDKATEENRCSPDWPFQPYLIFDVGCGREERDNDSFSNPQEVKL
VLELIRTIKEKRKDLGLRRIGIITPYSAQKKRIQEQMDRVFKSGSPEVDTVDAFQGREKD
CIIVTCVRANNAKGSIGFLASLQRLNVTITRARFSLFIIGRLKTLMENKDWNELIRDAQK
RGAIIKTSEKSYRKDAVKILKLKPTVQPPAKAGTKSPLLQGCSSSSKRGEPANPAEAGSR
WGGAAGHAVPXXXXXXXXXXXXCEAPLPAEQEKPRDPRLASMMSRTETRGTEQAPKASSW
SAQSHPGSTSQQGLEVSSAARDQLPRTETFNKPQQTMGQCDMPSVSSYAAWHDGDWRAPV
SKSGSKAHGEGGQINSSKWSKDCHGLTKRASEESPENAESNGVKRRKTSH
NT seq
8433 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaagagc
tatgcttctaaacagttgcccctggaagattttgaaggatccaatgatgatctctgctac
tgcttggagtgtgtggttgaataccacaaagcaagggagaaattgccaaggttgcatgag
gtcctgtggaagttggaaacctcccgtcttgttgcccacattgagaaatccatgcgagaa
gaagatggagaagatgatgagttgtttatagtggatgagaatggagagacaccactgtct
ggttatgtgggcccagattttgagaataacctacgagtgcccctcgtagaaatactgaaa
tatccatatctgctgctgcatgataaagtcagtgagctgtgtgtggaagtgctctgtaga
atggaacaaagtcacaactcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtgcacccgaatgaagtgattcgtcgatgggccatcctaacagcaaggaatttaggg
aaggttgacagggatgattattatgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttggggctctttgagaatccagatatttacggctcttcaatgattgaaaagggt
aaactcatccttctgccatctcatttatatgatactgctaactacaagaactattggcta
gggatttgtatgttgctaacagtgctggaagaacaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggaggcagaagcagct
gatgattctactgaccccttctggccagcgctacattgtttcatggttattttggatcag
ctcggatctaaagtgtggggtcagcttattgatcctgtccaggcctttcaaaccattatc
aacagtgagagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtgggactacgatgatgatacggttacttgcagtcagattgtttataat
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtacgaagatatgcaaacactggctaatgtgcttcagtctgatattggc
agagatatgcgtgtccatcacagcacatttctgtggttcatcccttttgtccagtcactt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctca
gaaatcaagaatattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtgtccattattgagctacacagaaataaaaagtgcctgcatttgctg
tggattagctcccaagaatgggtggaagccgtggtgagatgtgctaagcttccagctata
gcatttacacgatgcactgaaaaagcgtctggacattgtgtgagaggttcatcagcggta
tctttacaagcttctaactctgtgcagcacgcgtgtgtgcagttgatacgcagccttctt
agagaaggctatcaaattgggcagcatgctctttgcaagcagtacctagacaaactcaat
cttcttctgcgaggaaatctatctttaggttggcaactgaacatccaggaaacccaggaa
ttacaaatatgtttaaagcaagttataagaagtataaagggcagagcattgaatacctct
gtggctgcaggaaacaatgcaaactctacaaatttgcctactgtttctataaagcaagag
aagagtgcaggtggtgatagatgtaggatgagtgtacgtggcaggggtgacctttgttca
ccatttgctgtcatgtcaaaggaaggtggagatgaagattgccaagagaacctgttccct
actggaaagagtacttgtgaagaggaatgtagagatgcatctgaaagttcaagctcttgg
acatccactgaaggcctcttgaatattaaaaaggaagttaatgactggacaactcaggaa
tatatctgcccacagaacgctttggcagcaagagtatgtgggaactttcaggaagacggg
aacaatgatcttgtgggagggaaatgcaataaggataacgagtgctttaatccaagtgcc
cagcattcagatttcagaagaggtggcgagttagaaaacaaaagtgaagcagaacccaca
acaccaacatgcctggctgctcaaactcatattggttctccagaacatgttcacagctca
gatctaaaggaaagcaatatgtctcccagttcctctttgaagtttaaagtagatgtgcct
agactgatggatttgaaaaacaagatacagaaaactgaatgcccttcaaaagtattgcag
ctagtgaagccatacaaattgaaaaactgcagtttagcaacaagtgcttcaaaaggagag
gcaaaacaacctgtgttttgcactgactatcaatgtacgagcaaagattgtcataaacat
cagggacagagtactgtgtgtgaaaatgaaacctctgtcaatactccatcttcgaggtgt
tgtgaaagtacacagaagaaaagtgtcaacagtgcgtttcaatccagactgtttcccact
aaacagataccaaaagaaacaccaaaagattgttctgtctcctctaaaaatgaacctggt
atgcaggaaaatgaagatggcaatgatttgctctcagggattaatgacaccttactgaaa
aaagaatccactgatgaaaaaccaagttcattgttgaagtctgtgtttaagaaagacact
gacatgcaaacttcagaccgggaacagcctgatttaaatgactctgttaaatatgactct
aaaagtcaaatttcaaagatcatttgtatggataaaacttcagcaaacagtcatgttcca
tctacctctgaaaaaaagagggatatgtccagtcctgctgctcagatcaggccactgtca
gtgaagtgtgaatcaagtgacaggttgttcaatttttcagaatatttcaagagagagaac
aatgcagtggggaagaaagaggaggattttatgaagacggtttctgaagataatacttta
acagactcccaggttgataaagaactcagtaaattatctttaactgcatatgccaaaagt
gtcaattttccctttgactcaagccaagaaagcgcagtacatcataatgtatgtgatatt
aaaaggaaagtgaaaggtgctgtaagatcttccagtgatggccagaataccaagtctccc
tgcgatgtagattgccctgacaatcaagtcatcataatttcagactcttcggatgaagga
ggtgtgcctaacaagaaggaaacaaagaaaattgatgaagatgtgtgtcctgaaaagcag
ccttcaacttctagctgcatttctaatagtgatagcaaaatagaatcaaagatgccaggc
gctctgatgtctctcgaagagtgtgaatctcagtactttgaatttgaaacagaatatgat
gtcttttctgtttggcaagatactcaagcatatagtatggaagaaactcaggagtataaa
caaggttgtgtttcaacagaggttgacagtactagttcagatgacttcctgaatgattgc
acgaatcagtggggttatgatgtggattacataagtgacaataccacggaagaagcagca
acagacttggcagaaaagcagatagaaaatgtgtctcatcagataaaatctgataataca
aacgaagtaactaattcagcactgcaggaatctgttagcaagggaaatgcaaaagatgaa
ctggagggttttgcagacaaggatactgttgctaaagacttcaccctggattcagaattg
actcaacccagagcatctacatctagcatctcattagcttcaaagttggcccttaagaag
aatagtgcaagcccacggaagaatatagcaaaatctgaagtagcaagaactgttcaaaga
agtcctaaagcctctcctgtttttaaaacagcacaaaataaaaaactgcttcaaagtatt
ccaaaaaattctcaacctgccaggtcaatgcctgctgtggttcctccaaggaaggttcgg
cagtgtcctgcgccaacatcaactgtggaaaaacttggtctgaagaaggcaccccgcaaa
gcgtttgatttatcccagcgctctttagagagtctagctcaactgcgcagctatggcaaa
gctgcagggagagttggagttgcacagaaacagaaggttaaactaattgctcctcggagt
ttgtctataaaacataataaaaaaatgttagcctgccaagaccttcagtttttaaggcag
acgaggcccccaaaaagtgccagagtgaaaaatcttgcaggaagttctgaaagtagaaac
agaaaagttagcaaagtggttgtaaaaactatgaagcaaaagcctaaaacttttgagtgg
gcatctgttgaagggtctgttgaaaaccagagagaggaaaaaaggaaggaggctgactct
tcctctgccagtgagagaatatttgaaagcctgtgtgtggaggagaagacatgtctttct
caaatgcctaattcttcaggttcaaacagaaaatcagaggataacagtatgagggttcct
cctgtacctatggattcgagtctcttttctgttgcacgtgttggagatgataaagatgaa
cctccaggaggatgttgcattgtccagcccaagtgtgagaagacaacttcaaaagaaaat
gggtgtaaattgaatgaaaacagtgaagatgatgatgatctgtttttaactcagtcagat
cctgtggatatggaattatgttctaaggaggaaagtgttcaagttaacgttgaagttggt
aacaaaccagaggaaactggtactgctgaaagccttcagcagaatgaatccttgactatt
gtgaagtgtaagtacaaagactgtgtggaaaaagtggaaaagccagtagagtactgtagt
aagcattcagccaccagctcggaagctgatcacttgtttgccaaaccttttttcatgcca
ccttctaaaacaagaaagccttccactaccaaaattttcagctcagcaagttcttcacgg
aatgcagccttcagcaaggatctcgaagatattaaaaagttaccaccagcttcaaaaagc
aaagtgaatgcagcaaaaccagtcgtggtcaggccaccaaatgcaaagggtattccagta
ggaaatcaaacctgcaagtcttcaagtttcagtaatgtgtctcaaccccgtatttctaat
gttctccagtcaggaaacagacagaatgacaatgcttcaaatatttccagaaggcctgcc
caagaaccatattattcttcctttcttggcactcagcagcgtgatcatagtatttttgtt
aatgaagttctaaagtggacttacgacatgtttatgaacctcagccagtttggacctcca
agtactctcttgcagtctgtagtagcttctgttcctgtccgatttcagggatacaatgac
tattttaatacatttttccccttgatgatgctaaatgcctttgaaactctggcacaagag
tggatagaaaaccagagagtaagagaggagaagagttactacttctacttacagaacttc
tatgctgacttgaatacagcagaatttacggctcattttcaagaaagtgatttggcaagg
cagcttaatccaaaggaggatgacttagtctttttggtggtccaaaaggaaaaagacagc
tttagggaagaaagtgaagtggagaaccatatggtgcatcacgttggtcttgtgacacga
tttggtcgtgcatctggctgtttaactagacaaaaggaacagcataccatctgtcatctt
tctgtgcaaactcgaggcaatttgtctttcttcataaataagcaagtgaagtgtgtggtg
gttggctccctggtgaccacacatcgaaaattcagaggtctactactattgaacagaagt
cccctgcttaaacccatcttaaatccaagttacagtgacttctgtcccagagacttgcct
gtagcttcaggaagtgctgtattagatctgaatgaatacaatgaagatcaaaagagagcc
attgagacagcttatgccatggtaaagcaacatccagtgcttcccaagatctgcctcatc
cacggcccccctggaacagggaagtctaaaactattgttggacttctgtctcttgtgttg
agagaaaacactaggaacgagaaaacaactaaaaaaacaaattccaagatcaagccaaac
cgttttctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatcatc
attgcatttaaggaaaaatgccaaaacagacaggagcctttgggaaattgtggtgatatc
aaattagtgcgacttggtgctgaaaaagcaatcaacaatgaagtccggagatttagcctg
gttaagcaagttgaacatagaatgaaacgacagccatttgactgtgatcaggatatacag
aagaaaaaagcagctctggatcaaaagctggacatgctgtctcgtcagcgtgccatgcac
agatgtgagaagagggagagtcaaatattagatgatgaaattggcagactttcaaaggag
agacaacagcttgcttctcaactaaaggaggttcgggggcactctcagaaagtacaggca
gatatcatcttggaggccgacatcatctgctgcacgcttagcacaagtggaggaaatctg
ctggaatctgcattttcacggctaggagtggatcctttcagctgtgtcattgtggatgag
gcagggcagtcctgtgaggttgaaacactgattccgctgatccatcgctgtaataaactt
gtccttgttggagatcccagacagctccctcctactgtaaaatcagtaaaagctcaggac
tatggctacgatcagtccttgatggcacgcctgcagagacacttcgaggagcaagtgcgg
aagaatgttttgcaaagcctgccagttgtgcagctgactgtgcagtacaggatgcaccct
gacatctgcctcttcccatccaattatgtttatggcagggctctcaagactgacaaagca
acagaagagaacagatgttctccagactggccattccagccctaccttatttttgatgta
ggatgtggtcgtgaggagcgagataatgactcttttagtaaccctcaggaagtgaagctg
gtgttggaattaataagaacaattaaagaaaaaaggaaggatctgggacttcgtcgcatt
ggaataattaccccttacagtgcacagaaaaagagaattcaagaacaaatggacagagtg
tttaagagtggcagcccagaagtggacacagttgatgcgttccaggggcgagagaaagac
tgcatcatagtgacatgtgtccgggcaaacaacgctaaagggtccattgggtttctggca
agtcttcagcgtctgaacgttacaattaccagagccagattcagcctcttcatcattgga
agactgaaaacactcatggaaaataaagactggaatgagttgattcgggatgctcagaaa
agaggtgccattatcaagacatcagaaaaaagctacaggaaggatgctgttaagattttg
aagctcaagccaacggtgcagcccccagccaaagcagggacaaagtctcctctgttgcag
ggttgctcttctagtagcaagaggggcgagcctgcaaatccagcggaggctggcagccga
tggggaggtgccgctggccacgcggtgccgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnntgtgaggcgccgcttcctgctgagcaagagaaaccgcgggacccgaggctggcg
agtatgatgagtagaactgaaacaagagggactgagcaggccccaaaagctagcagttgg
tcagcccagagccatccaggatcaacgtcgcagcaaggcctcgaagtgtcctcagctgcc
agggatcagcttcccagaacagaaacttttaacaagccccagcaaacaatgggacaatgt
gacatgccttccgtgtcctcttacgcagcttggcacgacggtgactggagagctcctgta
tcgaaaagcggttcaaaagcccacggtgaaggaggtcaaattaatagcagtaagtggagc
aaagactgtcatggtttaacgaagagagcatcagaggagtcaccagagaatgcagaatca
aacggtgtcaagcgaagaaagacctctcactga
DBGET
integrated database retrieval system
