Falco cherrug (Saker falcon): 102058333
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Entry
102058333 CDS
T02911
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03022
Basal transcription factors
fch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102058333 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
102058333 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fch03021
]
102058333 (ERCC3)
03400 DNA repair and recombination proteins [BR:
fch03400
]
102058333 (ERCC3)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102058333 (ERCC3)
Transcription machinery [BR:
fch03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102058333 (ERCC3)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102058333 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
102058333
NCBI-ProteinID:
XP_014138499
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MPLKADHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSLY
AAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPDV
IQQLLQDHVIRDCRLRNAEGEETELITETFTSKSAISKSSEGGFGPSTSQGTDAQNKPDV
PADLYEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNP
DINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVL
GNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAE
RVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLI
GPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRAC
QFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKINT
IFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVS
QDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLDA
EEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHSSRSKASSNKHIHPLFKRFRK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaaggccgaccacgcctcgcgtcccctctgggtggctcctgatggccatatt
tttctggaagccttttctccagtttacaaatatgcacaggattttttggttgccattgct
gagcctgtgtgcagaccaacccacattcatgaatacaaactgactgcttactcgctatat
gctgctgttagtgttggcttacagacgagcgatatcacagagtatttacaaaaactgagc
aagactggggtcccagatggaataattcagtttatcaagctttgtactgtcagctatggg
aaggtgaagctggtactgaaacataacaggtattttgttgaaagtacccaccctgatgtc
attcagcagcttctgcaagaccatgtaattagggactgtcgcctgagaaatgctgagggt
gaagaaacagagctcattacagagacattcacgagtaaatcagcaatttctaaatccagt
gaaggtggctttggtccatcaacatcacagggaacagatgcccagaataagccagatgtc
ccagctgacttatatgagttttatgaacagatggacaaagatgaggaggaggaggaggaa
acacagacagtttcttttgaagtcaagcaggagatgattgaagaacttcagaagcgttgt
atccatttagagtaccccttgctggcagaatatgatttcagaaatgattctgtgaatcct
gatattaatatagatctgaaacctacagctgtcctcaggccctatcaagagaaaagcctg
agaaagatgtttggaaatgggcgagccagatctggtgttattgtcttgccatgtggtgct
ggcaagtctctagttggagtgacagctgcgtgtactgtccgcaagcggtgtctggtcctt
ggtaattctgcagtgtctgtagagcagtggaaagcccagttcaagatgtggtccaccatt
gacgacagtcagatatgccggttcacttctgatgccaaggacaagcctattggctgttcg
attgctatcagtacatattccatgttgggacacacaacgaaaagatcctgggaagcagaa
agagtaatggagtggcttaagagtcaagagtggggccttatgatacttgatgaagtacat
actatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcattgtaaactg
gggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctgatt
ggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgctaaa
gtacagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagaatatgtagct
atcaaaacaaagaaacggatactgctgtacaccatgaacccaaataaattcagagcctgc
cagttcctgattaagtttcatgagcgacggaatgataaaatcatcgtgtttgctgacaac
gtgtttgcactgaaggaatatgcgatcagactcgggaaaccttatatatatggtcctact
gcacaaggagaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatcaacact
attttcatttccaaggtaggtgacacatcattcgatctgccagaagccaatgttctgatt
cagatttcatcccatggtgggtctcgaagacaggaggctcaaagactggggcgagtgcta
agagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctcttgtatcc
caagacactcaggaaatggcatattcaacgaagcgacaacggtttcttgtagatcaaggt
tatagcttcaaggtaataacaaagcttgcaggcatggaagaagaagaactttcattttca
tccaaagaagaacagcagcagcttctccagaaagttctgcaagcatctgacttggatgct
gaggaggaagtagttgctggagaatatggttcaaagtcagctcaggtgtcccgtcgtaca
ggcacaatgagctctatgtcaggagcagatgatacggtttacatggagtaccactcttca
cggagtaaagcatcttcaaataagcacatccatccactatttaaacgcttccggaaatga
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integrated database retrieval system
