Falco cherrug (Saker falcon): 102059277
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Entry
102059277 CDS
T02911
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102059277 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102059277 (XAB2)
03041 Spliceosome [BR:
fch03041
]
102059277 (XAB2)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102059277 (XAB2)
Spliceosome [BR:
fch03041
]
Complex B
Other components
Prp19-related factors
102059277 (XAB2)
Complex C
102059277 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_19
TPR_16
Suf
TPR_MalT
ARM_TT21
ARM_TT21_C
CCDC84
Motif
Other DBs
NCBI-GeneID:
102059277
NCBI-ProteinID:
XP_027656063
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
SSRCPQEEEDVQHEEEILRNPFSVRCWLRYTQARQKGPRHRLNLLFERALRELPGSYKLW
YQYLRQRGARGEGGRPRHQRGRGWGAVAEVMLGTGAVCPPQLSPESAEEYVQYLRSVGRL
DEAAVRLARLVNDERFVSKEGKSNYQPPCPLPPQHPMPSPTPVSMSAQGQHLSLCHSRAT
PPPWSLVAPEPGPPRSPVPSPLSPQARDVYEEAVQTVMTVRDFTQVFDSYAQFEESVIAA
KMETVAELGKEEDEEVELELRLARFEQLMARRPLLLNSVLLRQNPHNVHEWHKRVQLYQG
RPEQIIHTYTEAVRTVDPFKATGRPHGLWVAFARFYEDNGQLDDARTILSKATRVRFKQV
EDLAAVWCEFGEMELRHQNYDEALRILRKATALPAKRAEYFDSTEPVQNRLYKSLKVWSM
LADLEESLGTFQSTKAVYDRILDLRIATPQIVINYGLFLEEHGYFEESFKAYERGIALFR
WPNVADVWHTYLSKFVTRYGGRKLERARDLFEQALDGCPQAHRVTSPGPQGSPGMSPGPH
GCPVPGMSPLPTSPQHSPTVDPQCHPLYPHVPQITGTFWQTWKDFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMASQMLKVYSSATGTGGHPG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
tcttcgcgctgcccgcaggaggaggaggacgtgcagcacgaggaggagatcctgcgcaac
cccttctcggtgcgctgctggctgcgctacacccaggcgcggcagaaggggccacgccac
cgcctcaacctgctcttcgaacgtgccctccgcgagctgcccggcagttacaagctgtgg
taccagtacctgcggcagcggggggcgcgaggggagggggggcgccccaggcaccagagg
ggccgtgggtggggggccgtggcagaggtgatgctggggacaggcgctgtgtgtcccccc
cagctgagccctgagagcgcggaggagtatgtgcagtacctgcgctccgtggggcgcctg
gatgaggccgccgtgcgccttgcccgcctcgtgaacgatgagcgcttcgtctccaaggag
ggcaagtcgaattaccagcccccgtgtccccttcccccacagcaccccatgccctctccc
acccctgtctctatgtcagcccagggccagcacctgtccttatgtcactctagggccacc
cccccgccctggtcccttgtcgcccctgagccaggcccccccaggagccctgtccccagc
ccgttgtccccgcaggcgcgggatgtctatgaggaggcggtgcagacggtgatgacggtg
cgggacttcacccaggtctttgacagctacgcccagttcgaggagagcgtcatcgccgcc
aagatggagacggtggcggagctgggcaaggaggaggatgaggaggtggagctggagctg
cgcctggcccgcttcgagcagctgatggcgcggcgcccgctgctgctcaacagcgtcctg
ctgcgccagaacccccacaacgtccacgagtggcacaagcgggtgcagctctaccagggg
cgccccgagcagatcatccacacgtacacggaggccgtgcgcaccgtggaccccttcaag
gcgacggggcgtccccacgggctctgggtggcttttgcccgcttctacgaggacaacggg
caactggatgacgcccgcaccatcctgagcaaggccactcgcgtgcgcttcaagcaggtg
gaggacctggccgccgtctggtgcgagttcggggagatggagctgcgccaccagaactac
gatgaggcgctgcgcatcctgcggaaagccaccgcgctgccggccaagagagcagagtac
tttgactccacggagcccgtccagaaccgcctctacaaatccctcaaggtctggtccatg
ttggccgacctggaggagagcctgggcaccttccagtccaccaaggcggtgtatgaccgt
atcctggacctgcgcatcgccaccccccagatcgtcatcaactatgggctcttcctggag
gagcacggctacttcgaggagagcttcaaggcctacgagcgcggcatcgcgctgttccgg
tggcccaacgtggcagacgtgtggcacacctacctcagcaagttcgtcacccgctacggg
gggcgcaagctggagcgggcgcgggacctgttcgagcaggcgctggacggatgtccccag
gcccacagggtgacgtccccagggccacaagggtccccagggatgtccccagggccacac
gggtgccctgtcccagggatgtccccgctgcccacctccccccagcattcccccacggtg
gatccccagtgccacccgctgtacccccatgtcccgcagatcacgggcaccttctggcag
acctggaaggactttgagatccgccacgggaacgaggacacgatccgggagatgctgcgc
atcaagcgcagcgtacaggccacctacaacacccaggtcaacttcatggcctcccagatg
ctcaaggtctacagcagcgccaccggcacaggtgggcacccgggg
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