KEGG   Falco cherrug (Saker falcon): 102059277
Entry
102059277         CDS       T02911                                 
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
fch  Falco cherrug (Saker falcon)
Pathway
fch03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fch00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102059277 (XAB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fch03019]
    102059277 (XAB2)
   03041 Spliceosome [BR:fch03041]
    102059277 (XAB2)
Messenger RNA biogenesis [BR:fch03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102059277 (XAB2)
Spliceosome [BR:fch03041]
 Complex B
  Other components
   Prp19-related factors
    102059277 (XAB2)
 Complex C
    102059277 (XAB2)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_14 HAT_PRP39_N TPR_12 TPR_2 TPR_19 TPR_16 Suf TPR_MalT ARM_TT21 ARM_TT21_C CCDC84
Other DBs
NCBI-GeneID: 102059277
NCBI-ProteinID: XP_027656063
LinkDB
Position
Unknown
AA seq 635 aa
SSRCPQEEEDVQHEEEILRNPFSVRCWLRYTQARQKGPRHRLNLLFERALRELPGSYKLW
YQYLRQRGARGEGGRPRHQRGRGWGAVAEVMLGTGAVCPPQLSPESAEEYVQYLRSVGRL
DEAAVRLARLVNDERFVSKEGKSNYQPPCPLPPQHPMPSPTPVSMSAQGQHLSLCHSRAT
PPPWSLVAPEPGPPRSPVPSPLSPQARDVYEEAVQTVMTVRDFTQVFDSYAQFEESVIAA
KMETVAELGKEEDEEVELELRLARFEQLMARRPLLLNSVLLRQNPHNVHEWHKRVQLYQG
RPEQIIHTYTEAVRTVDPFKATGRPHGLWVAFARFYEDNGQLDDARTILSKATRVRFKQV
EDLAAVWCEFGEMELRHQNYDEALRILRKATALPAKRAEYFDSTEPVQNRLYKSLKVWSM
LADLEESLGTFQSTKAVYDRILDLRIATPQIVINYGLFLEEHGYFEESFKAYERGIALFR
WPNVADVWHTYLSKFVTRYGGRKLERARDLFEQALDGCPQAHRVTSPGPQGSPGMSPGPH
GCPVPGMSPLPTSPQHSPTVDPQCHPLYPHVPQITGTFWQTWKDFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMASQMLKVYSSATGTGGHPG
NT seq 1905 nt   +upstreamnt  +downstreamnt
tcttcgcgctgcccgcaggaggaggaggacgtgcagcacgaggaggagatcctgcgcaac
cccttctcggtgcgctgctggctgcgctacacccaggcgcggcagaaggggccacgccac
cgcctcaacctgctcttcgaacgtgccctccgcgagctgcccggcagttacaagctgtgg
taccagtacctgcggcagcggggggcgcgaggggagggggggcgccccaggcaccagagg
ggccgtgggtggggggccgtggcagaggtgatgctggggacaggcgctgtgtgtcccccc
cagctgagccctgagagcgcggaggagtatgtgcagtacctgcgctccgtggggcgcctg
gatgaggccgccgtgcgccttgcccgcctcgtgaacgatgagcgcttcgtctccaaggag
ggcaagtcgaattaccagcccccgtgtccccttcccccacagcaccccatgccctctccc
acccctgtctctatgtcagcccagggccagcacctgtccttatgtcactctagggccacc
cccccgccctggtcccttgtcgcccctgagccaggcccccccaggagccctgtccccagc
ccgttgtccccgcaggcgcgggatgtctatgaggaggcggtgcagacggtgatgacggtg
cgggacttcacccaggtctttgacagctacgcccagttcgaggagagcgtcatcgccgcc
aagatggagacggtggcggagctgggcaaggaggaggatgaggaggtggagctggagctg
cgcctggcccgcttcgagcagctgatggcgcggcgcccgctgctgctcaacagcgtcctg
ctgcgccagaacccccacaacgtccacgagtggcacaagcgggtgcagctctaccagggg
cgccccgagcagatcatccacacgtacacggaggccgtgcgcaccgtggaccccttcaag
gcgacggggcgtccccacgggctctgggtggcttttgcccgcttctacgaggacaacggg
caactggatgacgcccgcaccatcctgagcaaggccactcgcgtgcgcttcaagcaggtg
gaggacctggccgccgtctggtgcgagttcggggagatggagctgcgccaccagaactac
gatgaggcgctgcgcatcctgcggaaagccaccgcgctgccggccaagagagcagagtac
tttgactccacggagcccgtccagaaccgcctctacaaatccctcaaggtctggtccatg
ttggccgacctggaggagagcctgggcaccttccagtccaccaaggcggtgtatgaccgt
atcctggacctgcgcatcgccaccccccagatcgtcatcaactatgggctcttcctggag
gagcacggctacttcgaggagagcttcaaggcctacgagcgcggcatcgcgctgttccgg
tggcccaacgtggcagacgtgtggcacacctacctcagcaagttcgtcacccgctacggg
gggcgcaagctggagcgggcgcgggacctgttcgagcaggcgctggacggatgtccccag
gcccacagggtgacgtccccagggccacaagggtccccagggatgtccccagggccacac
gggtgccctgtcccagggatgtccccgctgcccacctccccccagcattcccccacggtg
gatccccagtgccacccgctgtacccccatgtcccgcagatcacgggcaccttctggcag
acctggaaggactttgagatccgccacgggaacgaggacacgatccgggagatgctgcgc
atcaagcgcagcgtacaggccacctacaacacccaggtcaacttcatggcctcccagatg
ctcaaggtctacagcagcgccaccggcacaggtgggcacccgggg

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