Falco cherrug (Saker falcon): 102059660
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Entry
102059660 CDS
T02911
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fch03021
]
102059660 (SCAF8)
03041 Spliceosome [BR:
fch03041
]
102059660 (SCAF8)
Transcription machinery [BR:
fch03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102059660 (SCAF8)
Spliceosome [BR:
fch03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102059660 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102059660
NCBI-ProteinID:
XP_027671556
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MVIVKEEWQLNMQMEEGWYLRDGQGGSRRSLHAALSSGPASKHCAELYSLNDYKPPISKA
KMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVF
APRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLXAGIPPPVVTPVL
PSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQL
IQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDR
FDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPP
KASPEENQEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDVPEEEI
FEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSY
SSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESI
NMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDL
GVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAKENIQTTQSAAVDKNTVI
TTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFNPSQ
PPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQETMKDVPFTSLVLPVGTVT
SNLATPTLSAGSVFNPLPINKPESDEKGSHLTDLQISSSENNRSVQNDVSSSSGLVGGVQ
PPSVSSSSGLTGEGQPPSVSSGSGLAGGVQPPSVSSSSGLVGGVPPPTVSSSSGLAGGVQ
LPTVSSGSSLAGGVQPTSVSSSSGLMAGVQPPNVSSSSGLLAGVHPPSVSSSPGLLTGMQ
PPSVSSSSGVLAGVQPPCVSSNSGLLIMPPPNVSSSSGLMGVPPPNISSSSGLLAMQHPA
GVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPGPRFPLMQPGVPPQRSIPPPAILDPSLH
PPPRGPFPPGDIFNQTERPFGTPGRQNIDSIPNPXXXXXGDRDYRFPPVENRDNLSRPSP
VDVRDSVGRPPVDPREGIGRPPVDGREHFARPHVDMRENFGRPGMDNLGRREHFGFNSDK
HWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFD
DRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADN
MPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETEG
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggttatagtgaaggaggaatggcaactcaacatgcaaatggaggaaggatggtacctt
cgcgatggtcagggtggaagcagacgttccctgcatgcggccctgagctcaggtcctgca
tcgaagcactgtgctgagttgtactcactaaatgattataagccacccatttctaaagct
aaaatgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcatgttgta
cagagtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtacctggtctgtat
gtcattgactccattgtgagacagtcccggcatcagtttggacaagaaaaggatgtattt
gctccaagattcagcaataacatcatcagcactttccagaacttgtaccgttgtcctggg
gatgacaagagtaaaattgttagagtgctgaatttatggcaaaagaataatgtgttcaag
agtgaaattattcagcctctcnttgcaggaattcctcctccagttgtgacccctgtcttg
cccagcactacagctgctatgagcaacaatacaccaggaacccctgtgactccagttact
ccagccaatgtggtgcagagtttacctgatccttgggtatctcagattgctaatacagat
acccttgctgctgttgcacagattttacaaagtcctcaaggccaacagcttcagcagttg
atacagacactgcagatacagcaacagaaacctcagccttcgctacttcaagccctggat
gctggtcttgtcgttcagttacaggccctcacagcacaacttacagctgcagctgctgct
gctaacacacttaatccactggaacagagtgtctcttttaacaagaagctgatggacagg
tttgactttggggaagaatctgaacaaaatgaagagcctaaaaaggaaactcccacttcc
caactacctttagtgccagaatctgtgaacaactcactttttcaccaactagctgaacag
ctacagcaacaaaatttagaacatctcagacaacagcttcttgagcagcagcagcctcca
aaagcaagccctgaggagaatcaagaaggaaattttggttcagagcactctgcatcacca
tcacaagggagtagtcaacagcagtttttagaagtggaaacaaatgtggatgattcaatg
gatattcaacaacaggacatggatatagatgaaggacaggatgttcctgaagaagagatt
tttgaacaagaagaaaaaaaatcagctgttcgctcaagatcaagaactcgttcaagatct
cgttcaaggtctccaagaaaacgaaggtctagatcacggtctggttctcgtaagcgtaaa
cacagaaaacgttcacgctcgagatcaagagaaaggaagagaaagtcatctcggtcatat
tctagtgaaagaagggctagggaaagggaaaaagaacgtcagaaaaaaggattgcctcct
atacgctcaaaaacactaagtgtttgcagtactactctttgggtaggtcaagtagacaag
aaggctacacagcaagatttaactaatttgtttgaagaatttggacaaatagagtcaatt
aatatgattcccccaagaggttgtgcttatgtctgtatggttcatcgacaagatgcgtat
cgtgctcttcagaaacttagttctgggtcctataaaattggatctaaaattattaagatt
gcctgggctttgaataaaggtgtgaaaacagaatacaagcaattctgggatgtggatctg
ggagtttcatatattccttgggagaaagtaaaattggacgatttggaaggctttgctgaa
ggtggcatgattgaccaagaaacagtaaatacagaatgggaaacggccagaagctcagaa
gcagctaaagaaaatattcagactacacagagtgctgcagttgataagaatacagttatt
acaacacagacagaagcttatacgcaaccagtcactatgctgcagattccagtagctcca
gctgtgcctgctgttagcttggttccacctgcgtttcctgtcacaatgtctgtccctcct
cctggttatagtgcaattcctcctccacccttcttgcgagcgagtttcaacccttcacag
ccaccgccaggttatatgcctcccccagttcctcctgtggttccaccacctgttgtcccg
ccacctgttgtcccaccagttgttccaacacctttagtacagcctccattaccaattgca
caagagacgatgaaggatgttccttttactagccttgttctaccagttggcacagttact
agcaatctagctactccaacattatctgctggaagtgtttttaatcctctgccaatcaac
aaaccagaatcagatgaaaaggggtcacatcttacagaccttcagatttcttccagtgag
aacaacagatctgtgcaaaatgatgtctcgagtagctctggacttgttggaggagtgcag
ccacccagcgtctcaagcagttctgggcttactggagaagggcagccacccagtgtctca
agtggctctggacttgcagggggagtacagccacctagtgtttcaagcagctctggactt
gtaggaggagtgccaccaccaactgtttcaagcagttctggtcttgcaggaggagtgcag
ctacctactgtctccagtggctcttctcttgctggtggagttcagccaaccagcgtctcg
agtagctctggacttatggctggagtgcaaccaccaaatgtctcaagtagctcagggctt
ctagctggagtgcatccacccagtgtctcaagcagccctggcctgctgacgggaatgcag
ccacccagtgtctcaagcagctcaggagttctggcaggagtacagccaccgtgtgtgtca
agcaactctgggcttctcataatgccaccacccaatgtttcaagtagttctggacttatg
ggagtgccgccaccaaatatttcaagtagttctggacttctggcaatgcagcatccagct
ggggttcaaaacatgcctcatttaaatattagtagtcaaaggatgccgggaatgcctctt
atagatatccgtccaggcctaatgccccattcgcctggaccaaggtttccattaatgcag
ccaggagtgccaccgcagcgtagtattcctcctccagcgatccttgatccatctcttcac
ccaccacctcgaggtccttttcctccaggagatatttttaatcagacagaaagacctttt
ggaacaccaggaagacaaaatattgatagcattcctaatccnnnnnnnnnnnnnnnngga
gatagagattatcgctttcctccagtggaaaacagagataatcttagcagaccgtctcca
gtggatgtcagagattctgttggacgaccaccagttgatccaagagagggtataggaaga
cctccagtagatggacgagaacactttgcaagaccacatgtagacatgagagagaatttt
ggaagaccaggtatggataaccttggtcgaagagagcattttggtttcaattcagacaag
cactggggacagagaggagattatgatgaaagagagcaccatgccttccctatttatggt
ggccctaaaggcttccatgaagacagagagaggtttcggcatgtaaactataggtttgat
agtagaagtggtcccaattggaacagaggatttgaacaagatgctcacagagattttgat
gaccgcagaagaccctgggaaagacagagggatagggatgacagagattttaatttttgc
agagaaattaatgggaacaggtttggaagagacagaatgtcaaacaactggatcccccct
ccacatccacgggtttttgaatattttgatggggccacttcccaacgcaaagccgataat
atgccccaggtaaacggtgaaaatacagagacagaaagtcagccaccgactgcacaggtg
caggatgatccagaactttatgaaaaactgacatcttccgtcgagataaacaaagagaag
agtgacacagaagctgatatagaaagtgaaccagtggtagaaagcacagaaactgagggg
acataa
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