Falco cherrug (Saker falcon): 102059900
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Entry
102059900 CDS
T02911
Symbol
COL2A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102059900 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102059900 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102059900 (COL2A1)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102059900 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
102059900
NCBI-ProteinID:
XP_027656760
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
AEAGSFLQDGQSYRDKDVWKPEPCRICVCDTGTVLCDEIICEELRDCPSPEIPFGECCPI
CPTDQPSGQPGPKVVGPRGPPGPQGPAGEQGQRGDRGAKGEKGAPGPRGRDGEPGTPGNP
GPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPLGPMGPRGPPGPSGSPVSTNPPPGS
GXXXXXXGPPGPPGKPGDDGETGKPGKSGQRSPPGPQGARGFPGTPGLPGVKGHRGYPGL
DGAKGEAGGPGAQGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGP
PGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGI
PGAKGSAVSAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETV
SPGGPHPAPPAAGGPGAPRSPPGXGGPRGVMPPXTPRLTPSPPSHPAQGAPGERGPAGLA
GPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQP
GVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAP
GPSGFQGLPGPPGPPGESGKPGDQVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGP
KGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGP
IGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGE
QGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGP
NGXXXXAGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGP
DGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGL
TGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGD
RGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGP
AGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGT
GIDMSAFAGLGQTEKGPDPIRYMRADDAGDYWIDPNQGCTLDAIKVFCNMETGETCVYPN
PSSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLSTEGSQ
NVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGK
TVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
gccgaggcaggcagcttcctgcaggacgggcagagctatcgcgataaggacgtgtggaag
ccggagccgtgccgtatctgcgtgtgcgacacggggaccgtcctctgcgacgagatcatc
tgcgaggagctgcgggactgccccagccccgagatccccttcggagagtgctgccccata
tgccccactgaccagcccagcgggcaacctggccccaaggttgtaggaccccgagggccg
ccgggaccgcagggcccggcaggtgagcaaggacaacgaggggaccgtggcgcgaagggg
gagaagggcgctcccggcccccggggcagggatggggaacccggcacccctggaaatcct
ggtccccccggcccccccggcctcggtgggaacttcgcggcgcagatggcgggcggcttt
gacgagaaggctggaggcgcgcagatgggcgtcatgcagggacctctgggccccatggga
ccccgcggcccccccggaccctccggctctcccgtaagtaccaaccccccgccaggctcg
ggnnnnnnnnnnnnnnnnnggggaccaccgggacctcctgggaaacccggcgatgacggc
gagactggcaaacctgggaaatctggccagcgcagcccccccggcccccagggtgctcgt
ggcttccccgggacgcccggtctccctggagtgaaaggccaccggggttaccccggcctt
gacggtgccaaaggagaggcaggggggcccggggcgcagggtgaatccggctcccccggc
gagaacggctcccctggccccatgggtccccgtgggctgcccggagagagaggacgtccc
ggcccctccggcgctgcgggtgctcgtggcaacgacggcctccctggcccagctggaccc
ccgggacctgtcggcccagccggagcccccggcttccccggcgcccccggctcgaagggt
gaagctggtcccaccggcgcgcgaggtcctgagggtgcccagggcccccgcggtgaatcc
gggacccccggctcccccggccctgctggcgcccccggcaacccagggaccgacggcatc
cccggcgccaagggctcggcggtgagtgcccccggcatcgctggcgctccaggcttcccc
ggaccccgcggcccacccggaccccagggtgccactggcccgctgggacccaagggacag
acgggagaacccggcatcgcgggcttcaaaggcgagcagggacccaagggcgagacggtg
agtcctggggggccacatccagcgcccccggccgccgggggtcccggggcccctcgctcc
ccaccggggngggggggccccaggggggtgatgcccccctgaacccccagactcacccct
tctcccccctcccaccccgcacagggtgctccaggcgagcgcggccccgctggcctcgca
ggtcccaagggagccaccggtgaccccggccgccctggcgagcctgggctgcccggagcc
aggggtctcaccggccgcccaggcgacgctggtcctcaaggcaaagttggcccaacgggt
gctcccggcgaggacggccgccctggcccccccggcccgcagggtgctcgaggccagcct
ggcgtgatgggtttccctggtcccaagggtgctaacggcgagcctggaaaagccggcgag
aaggggctgcccggcgccccggggctgcggggtcttcccggcaaggacggcgagacggga
gctgccggccccccgggacctgccggtcccgcgggcgagaggggagagcaaggagccccc
ggcccctctggcttccaggggctgcccgggccaccaggtccccctggagagagcggcaaa
cccggagatcaggttggtcccagaggtgaacgcggcttccccggtgagcgtggctctcct
ggcgcccaagggctgcaaggtccccgtgggctccccggcacaccgggcactgacggaccc
aagggtgccaccggaccagctggccccaacggcgcccagggcccccccgggctgcagggg
atgcccggtgagagaggagccgccggcattgctggtcccaagggggaccggggagacgtc
ggagagaagggccctgagggagcccctggaaaggacggcgcacgcggtctgacaggtccc
atcggtccccccggccccgctggccccaacggcgagaagggtgaatcgggacctcctggt
ccatccggtgctgccggtgcccgcggtgcccccggcgagcgcggtgagcctggtgccccc
ggtcccgccggatttgccggacccccgggtgccgacgggcaacctggtgccaaaggcgag
caaggagagcccggccagaagggtgacgccggcgctccgggtccccaaggtccctccggc
gcacctggcccacagggtccaactggtgtaactggtcccaaaggagcccggggtgctcag
ggcccccctggagccactggattccccggcgctgccggccgcgtgggaccacctggccct
aacggtcnnnnnnnnnncgcaggcccccccgggccccccggctccgctggcaaagatggt
cccaagggtgctcgtggcgacgccggtcccccgggccgtgctggtgaccccggtctccaa
ggccccgccggtccccctggcgagaagggcgaacccggcgaggacggccccgccggtcct
gatggtcccccaggtccccagggcttggcaggacagcgtggcatcgtcggtctgcctgga
cagcgcggcgagagaggcttcccggggctgcctgggccctcgggcgaacctggaaaacaa
ggagcacccggctctgcaggtgaccgagggccccctggccctgtgggtccccccggtctg
acgggtcctgccggtgaacctgggcgcgagggtaaccctggctctgacggacccccgggc
agggacggcgcggccggcgtgaagggtgatcgtggtgagaccggtcccgtgggtgccccc
ggtgctcccggtgcccccggcgctcctggccccgtcggtcccactgggaaacaaggagac
agaggcgagacgggtgcacaaggtcccatgggtccctccggtcctgctggcgctcgaggc
atgccgggtccccaggggcctcgtggtgacaagggtgagacgggagaggctggagagaga
gggctgaagggccaccgtggcttcaccgggctgcagggtcttcccggaccacccggcccc
gcgggtccctccggtcccaggggtccccctggccccgttggcccctccggcaaagacggc
tccaatggcatgcccggccccatcggtccccccggcccccgcggacgaagcggcgaacca
ggtcctgcgggtcctcctggaaacccgggtccccccggtcctcccggccccccgggcact
ggcatcgacatgtcggctttcgccgggctgggtcagacggagaagggtcccgaccccatc
cgctacatgcgggcggacgacgcaggagactactggatcgacccgaaccagggctgcacc
ttggacgccatcaaagttttctgcaacatggaaacgggtgagacctgcgtctaccccaac
cccagcagcatccccaagaagaactggtggaccagcaagaccaaagacaagaagcacgtc
tggtttgcagagaccatcaacggcggtttccatttcagctacggcgatgaggacctggct
cccaacaccgccaacatccagatgaccttcctgcgcctcctgtccacggagggctcccag
aacgtcacttaccactgcaagaacagcatcgcctacatggacgaggagacaggcaacctg
aagaaggccatcctcatccagggctccaacgacgtggagatcagagccgagggcaacagc
aggttcacgtacagcgtcctggaggacggctgcacgaaacacactggcaagtggggcaag
acagtcatcgagtaccggtcgcagaagacctcgcgcctgcccattgtagatattgcacct
atggacattggtggagccgatcaggagtttggtgtggatattggcccagtctgcttcttg
taa
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