Fusobacterium canifelinum: I6I83_00180
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Entry
I6I83_00180 CDS
T07213
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fci
Fusobacterium canifelinum
Pathway
fci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I83_00180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fci03019
]
I6I83_00180
03009 Ribosome biogenesis [BR:
fci03009
]
I6I83_00180
Enzymes [BR:
fci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I83_00180
Messenger RNA biogenesis [BR:
fci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I83_00180
Ribosome biogenesis [BR:
fci03009
]
Prokaryotic type
rRNA helicases
I6I83_00180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DeaD_dimer
NDK
AAA_22
2H-SAK
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QQS87609
UniProt:
A0A3P1UVP6
LinkDB
All DBs
Position
37446..39032
Genome browser
AA seq
528 aa
AA seq
DB search
MEQLEKLKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKT
AAFSLPIIENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVIPVYGGQSIDIQR
KLIKTGVDVVVGTPGRVIDLIERKLLKLNSLKYFILDEADEMLNMGFVEDIEKILTFTNE
DKRMLFFSATMPDEIMKVAKTHMKEYEVLAVKSRELTTDLTEQIYFEVNERDKFEALCRI
IDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYREVTLKRFKSKKINIL
VATDVAARGIDINDLSHVINYAIPQEVESYVHRIGRTGRAGKEGTAITFITPQEYRRLLQ
IQKAVKKEIKKEKLPDVKDVIQAKKFRIIDDIGQILIDNDYDKFKKLAKDLLKMEDAENI
VASLLKLSYSDVLDESNYNEISPVKMEDTGKTRLFIAMGRKDGMTPKKLVEFIIKKAKVK
QSYIKNAEVYEGFSFVSVPFKEAEIIVEAFAQNRKGKKPLIEKAKSKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattagaaaagttaaaagaatttagagaattagggcttggtgaaaaggtattg
aaggtgttatcaaaaaagggatatgaatctcctacacctatacaaagattaacaatacct
gcacttttaaaaaatgataaagacataataggacaagcacaaactggaacaggtaaaact
gctgctttttctttaccaataatagagaactttgagaatttagaacatatacaagcaatc
gttttaacaccaacaagagaattagctctacaagttgcagaagaaatgaatagtttaagt
acaagtaaaaagatgaaagtaattcctgtctatggtgggcaatcaatagatatccaaaga
aaacttattaaaactggtgtggatgtggttgtaggtacacctggtagagttatagattta
attgaaagaaaattattgaagttaaactcattaaaatattttatcttagatgaagcagat
gaaatgcttaatatgggatttgttgaagatatagaaaagatattaacttttacaaatgaa
gataaaagaatgttatttttctctgcaactatgcctgatgaaattatgaaagttgctaaa
actcatatgaaagaatatgaagttctagctgttaaaagtagagaacttacaacagattta
acagaacaaatatattttgaagtaaatgaaagagataagtttgaagcactatgtagaatt
atagatttaacaaaagaattttatggtattattttttgtagaacaaagactgatgtaaat
gaaattgttggaagattaaatgatagaggttatgatgctgaaggtctacatggagacata
gggcaaaattatagagaagttactttaaaaagatttaaatccaagaaaataaatatcctt
gttgcaacagatgtggctgcgagaggtatagatataaatgatttaagccatgttataaac
tatgctattccacaagaggttgaaagttatgtacatagaataggaagaactggacgtgct
ggtaaagaaggaactgctataacttttataactccacaagagtatagaagacttttacaa
attcaaaaagcagtaaaaaaagaaattaaaaaagaaaaattacctgatgttaaagatgtt
atccaagctaaaaagtttagaattatagatgatattgggcaaattttaatagataatgat
tatgataaatttaaaaaattagctaaagatttacttaaaatggaagatgctgaaaatatt
gttgcctctcttttaaaattatcatacagtgatgttttagacgaaagcaactataatgaa
atctctcctgtcaaaatggaagacactggtaaaacaagattattcattgctatgggaaga
aaagatggtatgacacctaaaaaattagttgaatttattatcaaaaaagctaaagtaaaa
caaagctatattaaaaatgcagaagtttatgaaggtttctcatttgtttctgtacctttc
aaagaagcagaaatcatagttgaagcttttgcacaaaatagaaaaggaaaaaaaccatta
atagaaaaagcaaaatctaagaaatag
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