Fusobacterium canifelinum: I6I83_02325
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Entry
I6I83_02325 CDS
T07213
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fci
Fusobacterium canifelinum
Pathway
fci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I83_02325 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fci03019
]
I6I83_02325 (pnp)
03016 Transfer RNA biogenesis [BR:
fci03016
]
I6I83_02325 (pnp)
Enzymes [BR:
fci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I6I83_02325 (pnp)
Messenger RNA biogenesis [BR:
fci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6I83_02325 (pnp)
Transfer RNA biogenesis [BR:
fci03016
]
Prokaryotic type
tRNA degradation factors
I6I83_02325 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SAC3
Motif
Other DBs
NCBI-ProteinID:
QQS87987
LinkDB
All DBs
Position
complement(457335..459434)
Genome browser
AA seq
699 aa
AA seq
DB search
MFDEKIMELELAGRTLKVSTGKISRQSSGAIVIQYGDTVLLSTANRSKEARKGADFFPLT
VDYIEKFYSTGKFPGGFNKREGRPSTNATLVARLIDRPIRPMFPDGFNYDVHIVNTVLSY
DEINIPDYLGVIGSSLALMISDIPFLGPVASVIVGYKNGEFILNPSPKELEESELDLIVA
GTKEAVNMVEAGAKELDEETMLKAIMFAHENIKKICEFQEEFSKLYGKENIEFEKPEVLP
LVKNFIDTNGHERLQKAVLTTGKKNREDAVDSLEEELLEKFIQENYPDVPEEELPEDVIL
EFKTYYHDLMKKLVREAILYHKHRVDGRTTTEIRPLDAQINVLPIPHGSALFTRGETQSL
AITTLGTKEDEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLAERAL
RYVIPTEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMGLIKE
GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAHQARI
QILEVMNNTISKPAELKSNVPRIQQITIPKDKIAALIGPGGKNIKGIIEQTGATVDITDD
GLVSVFAKDADTLEKTLKLVDSFVREVEYNEVYEGRVVSIMKFGAFMEILPGKEGLLHIS
EISPERVEKVEDVLSVGDVFNVRVISMEGGKISLSKKKV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgaaaaaattatggagctagagcttgctggaagaactttaaaagtttcaact
ggtaaaatttctagacaatctagtggagctattgtaattcaatatggagatacagttctt
ctatctactgctaaccgtagtaaagaagcaagaaaaggtgctgactttttcccattaact
gttgactatatagaaaaattttattcaactggtaaattccctggtggatttaacaaaaga
gaaggaagaccttcaacaaatgctacattggtagcaagacttattgatagaccaataaga
ccaatgtttccagatggttttaactatgatgtacatatagttaatactgttctgtcttat
gatgaaataaatattcctgattatttaggtgtaattggttcatctcttgcacttatgatt
tctgatattccattcttaggacctgttgcaagtgtaatagttggatacaaaaatggagaa
tttattttaaatccttctccaaaagaattggaagaaagtgaacttgatttaattgttgca
ggaacaaaagaagctgtaaacatggttgaagcaggagcaaaagaactagatgaagaaact
atgttaaaagcaattatgtttgcacatgaaaatattaaaaagatttgtgaattccaagaa
gaattttctaaattatatggaaaagaaaatatagaatttgaaaaaccagaagtattacct
cttgttaaaaatttcatagacactaatggacatgaaagattacaaaaagctgttttaact
actggtaagaaaaatagagaagatgctgttgattcattagaagaagaattgttggaaaaa
ttcatccaagaaaactatcctgatgttcctgaagaagaattaccagaagatgtaatatta
gaatttaaaacttactatcatgatttaatgaaaaaattagttagagaggctattttatat
cataaacatagagttgatggaagaacaacaactgaaataagaccattagatgctcaaata
aatgtattacctattcctcatggttcagcattatttacaagaggagaaactcaatctctt
gcaattacaacattgggaactaaagaagatgagcaattaatagatgacttagaaaaagag
tattataaaaaattctatttacactataacttccctccatattcagttggagaagttgga
agaatgggttcacctggaagaagagaattaggacatggttcacttgctgaaagagcttta
agatatgtgattcctactgaagaagaattcccttacactataagagttgtttctgaaata
actgaatctaatggttcatcttcgcaagcttctatctgtggtggttctttatcactcatg
tcagctggtgttcctataaaagaacatgttgctggtatagcaatgggacttattaaagaa
ggagaagaatttacagttctaacagatataatgggacttgaagaccacttaggagatatg
gacttcaaggttgctggtacaaaatctggaatcacagctttacaaatggatattaaaatt
acaggtataactgaagaaattatgagaattgctttaaatcaagctcatcaagctagaatt
caaatattggaagttatgaataatacaatttctaaacctgctgaattaaaatctaatgtg
cctagaatacaacaaattactattccaaaagataagattgcagctcttattggaccaggt
ggaaaaaatattaaaggtatcatagaacaaacaggagctactgttgatataactgatgat
ggacttgtatctgtttttgcaaaagatgctgatacattagaaaaaactttaaaacttgta
gattcttttgtaagagaagttgaatacaatgaagtttatgaaggacgtgtagtttctata
atgaaatttggtgcatttatggaaattttacctggtaaagaaggtttactacacatttct
gaaatttcaccagaaagagttgaaaaagttgaagatgtactttcagttggagatgtattt
aatgtaagagttatttctatggaaggtggaaaaatctctttaagcaaaaagaaggtttaa
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