Fusobacterium canifelinum: I6I83_05140
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Entry
I6I83_05140 CDS
T07213
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fci
Fusobacterium canifelinum
Pathway
fci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6I83_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fci03021
]
I6I83_05140
03400 DNA repair and recombination proteins [BR:
fci03400
]
I6I83_05140
Enzymes [BR:
fci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6I83_05140
Transcription machinery [BR:
fci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6I83_05140
DNA repair and recombination proteins [BR:
fci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6I83_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQS88521
LinkDB
All DBs
Position
1023675..1024655
Genome browser
AA seq
326 aa
AA seq
DB search
MLKIEKQAKAIKITEVKESNYKGQFIVEPLYRGYGNTLGNALRRVLLSSIPGAAIKGMRI
EGVLSEFTVMDGVKEAVTEIILNVKEIVVKAESSGERRMSLSVKGPKVVKASDIVADIGL
EIVNPEQVICTVTTDRTLDMEFIVDTGEGFVVSEEIDKKDWSVDYIAVDAIYTPIKKVSY
EIQDTMFGRMTDFDKLTLNVETDGSIEIRDALSYAVELLKLHLDPFLEIGNKMENLRDDI
EEMIEEPMDIQVIDDKSHDMKIEELDLTVRSFNCLKKAGIEEVSQLASLSLNELLKIKNL
GKKSLDEILEKMKDLGYDLEKNGSPE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagaaaagcaggctaaagcaataaagataacagaagttaaagaaagtaat
tacaaagggcaatttattgtagaacctttatatagaggttatggaaatactttaggaaat
gcattaagaagagttttactttcatctatacctggagcagcaataaaaggtatgagaatt
gaaggtgtattaagtgaatttactgttatggatggtgttaaagaagctgttacagaaatt
atcttaaatgttaaagaaatagttgtaaaagcagaaagttctggagaaagaagaatgtca
ctttctgtaaaaggtcctaaggttgtaaaagcttcagatattgttgcagatattggactt
gaaatagtaaatcctgaacaagttatttgtactgtaactactgatagaacattagatatg
gaatttatagtagatacaggagaaggatttgttgtatcagaagaaatagataaaaaagat
tggtctgtagattatatagcagttgatgctatttatacaccaattaaaaaagtttcttat
gaaattcaagatacaatgtttggtagaatgactgacttcgataaattgactttaaatgtt
gaaactgatggaagtatagaaataagagatgctctatcatatgctgttgaacttttaaaa
ttacatttagatccattcttagaaataggaaataaaatggaaaatttaagagatgatata
gaagaaatgattgaagaaccaatggatattcaagttattgatgataagtctcatgatatg
aaaatagaagaattagatttaacagtaagatcttttaattgcttaaaaaaggctgggata
gaggaagtatctcaattagcaagcttatctttaaatgaattattaaaaattaaaaacttg
ggaaaaaaatctcttgatgagattttagaaaagatgaaagatttaggatatgatcttgaa
aaaaatggatctcctgaataa
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