Fusobacterium canifelinum: I6I83_09110
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Entry
I6I83_09110 CDS
T07213
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fci
Fusobacterium canifelinum
Pathway
fci03420
Nucleotide excision repair
fci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I83_09110
03430 Mismatch repair
I6I83_09110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fci03400
]
I6I83_09110
Enzymes [BR:
fci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I83_09110
DNA repair and recombination proteins [BR:
fci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I83_09110
MMR (mismatch excision repair)
Other MMR factors
I6I83_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
Cas_Cas4
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
DUF2800
CowN
PhoH
Helicase_RecD
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQS87200
LinkDB
All DBs
Position
1864678..1867437
Genome browser
AA seq
919 aa
AA seq
DB search
MSNLNKKQFEAVETVNGPVVIIAGPGTGKTKTLVERTVNILVNKEVEAKKIMITTFTNKA
ARELELRINERLEELNKNIDISDMYLGTMHSIWTRLIQENITYSNFFDNFELMSGDYEQH
FFIYSRLKEYKKLEDYQKFFDNLSYNENKYRSDWQKSSFLRNKINDLNENAIDIESVQTS
DIYINFIKSAYKLYEKQLFENNIVDFSYLQVEFLNMLLKNNDFLEKINNHFDYIMIDEYQ
DSNKIQEKILLSISKNKKNICVVGDEDQSIYRFRGASAENILNFSKYFTNDECKCIVLEE
NYRSVNDIVEFNNKWINAINWHGNRFEKNIVSMRLDNILSKSVFHVSGSTLDENIRNTVT
FIKKLKQSNKITNYNQIAVLFSHFKDRSAKKLEDALKKENIEVYSPRTKVFFEMYEVKLT
FGIILACFKKYFPEEALDTYLLECLDLARLEIRKDNEFLTWIKEKIENISEYSFNSLNEI
FYELLNFSYYKNILKEEGPIEARANHNLAILSKIFKNFQKYVHSKKISIEDAFSIIKYFF
TKYLEILKQSRVDEIFSEEDYPNDCIPFLTIHQSKGLEFPVVIVFSLYSKPNVSGDLSRQ
TSIDRLINSNSKISEIDKEYFDFYRKFYVAFSRAKNLLVLSCYEKGISENFKPFFYSVRG
VNSLQFDINQINLDKVSKKDERRILSYTTDIALYRYCPMKYFLVREKEYSTFDKKVFNLG
IITHKAIEHINKSFLQKQEIFSDNYIEDLVKNIYKFQNIDLDNNVERIIDIVKKYIEDEK
DNFKYIKKVEASEFRVEDNYILYGQIDLILEDENEIKIIDFKTGKYNEIKFSSNYRQQLS
LYKLLLQKKYDKEIKTYLYYLEEDEPKKEILIDDENLKEDLENINKTVQDILDKKFPKIP
YNQNICGLCEFKNYCWGIQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttgaataaaaaacaatttgaagcagttgaaactgtcaatggtcctgttgta
ataatagcagggcctggaacaggaaaaaccaaaactcttgttgaaagaactgtaaatatt
cttgtcaataaagaagtagaagctaaaaaaattatgataactacttttacaaataaggct
gccagagaattggaacttagaataaatgaaagactagaagaattaaataaaaatatagat
ataagtgatatgtacttaggaactatgcattctatttggacaagacttatacaagaaaat
atcacttattctaatttttttgataactttgagcttatgagtggagattatgagcaacat
ttttttatttattcaagattaaaagaatacaaaaaattagaagattatcaaaagtttttt
gataatctttcttataatgagaacaaatatagaagtgattggcaaaagagttcttttctt
agaaataaaataaatgatttaaatgaaaatgcaatagatattgaaagtgtacaaacttct
gatatttatataaactttataaaatctgcttataaactttatgaaaaacaactttttgaa
aataatatagttgatttttcttatttgcaagtagaatttttaaatatgcttttaaaaaat
aatgattttttagaaaaaataaataatcattttgactatattatgattgatgaatatcaa
gatagtaataaaatacaagaaaaaatactactttctatttcaaaaaataaaaaaaatatc
tgtgttgtaggagatgaagaccaatctatttatagatttagaggagcaagtgctgaaaat
attttaaacttctctaagtattttactaatgatgaatgtaaatgtatagtattggaggag
aattatcgttcagtaaatgatatagttgaatttaataacaagtggattaatgctattaat
tggcacggaaatagatttgaaaaaaatatagtatcaatgagattagataatattttgagt
aaaagtgtttttcatgtttctggaagtaccttagatgaaaatatcagaaatactgtaact
tttataaaaaaattaaaacaaagtaataaaattacaaactataatcaaattgctgtccta
ttttcacattttaaagataggtctgcaaaaaaattggaagatgctttaaaaaaagaaaat
attgaagtttattctccgagaacaaaagttttctttgaaatgtatgaagtgaaattaact
tttggaataattttggcttgttttaaaaaatatttcccagaagaagcacttgacacatac
ttattagagtgtctggatttagcaagattagaaattagaaaagataatgaatttttaact
tggataaaagagaaaattgaaaatatttctgaatatagtttcaactctttaaatgaaatt
ttttatgaattattaaatttttcttattataaaaatattttaaaagaagaaggtcctatt
gaagcaagagctaatcataatctagctatacttagtaagatatttaaaaactttcaaaag
tatgtacattctaaaaaaataagtattgaagatgctttttctataattaaatattttttc
acaaaatatttagaaattttgaaacagtcaagggttgatgagattttttctgaggaagat
tatcctaatgattgtattccatttttaactatacaccaatcaaaaggtttagaatttcca
gtagttattgtattctcattatattctaaacctaatgtaagtggagatttatcaagacag
acaagtatagatagacttatcaattcaaattctaaaatttctgaaatagataaagaatat
tttgatttttatagaaaattttatgtagcttttagtagagcaaaaaatttattagttcta
agttgctatgaaaaaggaatttctgaaaactttaaaccttttttttattcagttcgtgga
gtaaatagtttacaatttgatataaatcaaataaatttagataaagttagtaaaaaagat
gaaagaagaattttatcatatacaactgacattgcactttatagatattgccctatgaaa
tattttttagtgagagaaaaagaatactcaacttttgataaaaaagtatttaatttaggg
ataataactcataaggcaatagaacatataaataaatcatttttacaaaaacaagaaatt
ttttctgataactatatagaagatttagtaaaaaatatctataagtttcaaaatatagat
ttagataacaatgttgagagaataatagatattgttaaaaaatatattgaagatgaaaaa
gataattttaaatatataaaaaaggttgaagcctctgaatttagagttgaagataattat
attctatatgggcaaatagatttaattttagaagatgaaaatgaaattaaaattatagat
tttaaaacaggaaaatataatgaaattaagttttcttctaattataggcaacaactatca
ctatataaattacttcttcaaaaaaaatatgataaggagataaaaacttatctatattat
ttggaagaggatgagcctaaaaaggaaattcttattgatgatgaaaatttaaaagaagat
ttagaaaatataaataaaacagttcaagatattttggataagaaatttcctaaaattcca
tataatcaaaatatctgtgggctttgtgaatttaaaaactattgttgggggatacaatga
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