Flavobacterium capsici: RN605_01565
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Entry
RN605_01565 CDS
T10574
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
fcj Flavobacterium capsici
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcj03000
]
RN605_01565
Transcription factors [BR:
fcj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RN605_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_3
MRG
DUF6376
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WNM22058
UniProt:
A0AA96F302
LinkDB
All DBs
Position
complement(337346..338287)
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AA seq
313 aa
AA seq
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MTITQLQYVLAVAEHKNFTLAAEKCFVTQPTLSMQIQKVEDELGIQIFDRTKKPIQLTDI
GQKIVNQAKNIVNEADRIMDIVDQQKGFIGGEFRLGIIPTVMPTLLPMFLNNFIKKYPKV
NLVIEELNTEEIIQRLNNGHLDAAIAATPLNEEKIKEIVLYFEPFVAYIPENHKSFPKNE
IEIDDLDLNEILLLQDGHCFRDGILNLCKNQNVNEKTQFQIESGSFETLIKLADEGLGTT
LLPYLHTLDLKEKDKLKLRHFKEPKPAREVSIIYPKNELKIQIIDALRNTIAGVVKGAIV
FQNVEIISPLQKK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcacacaacttcaatatgttcttgctgttgcagaacacaaaaactttactctt
gctgcagaaaaatgttttgtaactcaacctactttgagtatgcaaattcaaaaagtggaa
gatgaattaggaattcagatttttgatagaacaaagaaacctattcagcttacagatatt
ggtcaaaaaattgttaatcaagctaaaaacattgttaatgaagctgatagaataatggat
atcgttgaccagcaaaaagggtttattggtggtgaatttagattaggaatcatacctaca
gttatgcccacacttttgccaatgtttttaaataatttcataaaaaaatatccgaaagta
aatttagttatagaagaattaaatacagaagaaataattcagcgtttaaacaatggtcat
cttgatgcagcaattgcagcaacgccattaaacgaagaaaaaataaaagaaattgtatta
tactttgaaccttttgttgcctacattcctgaaaatcacaaatcatttcctaaaaacgag
attgaaattgatgatttagatttgaatgaaattttattactacaagacggacattgtttt
agagatggaattttgaacctatgtaaaaatcaaaatgtaaatgaaaaaacacagtttcaa
attgaaagcggaagttttgaaacactaattaaactagctgatgaaggattaggaactaca
ttacttccttatttgcatacattagatttaaaagaaaaagacaagctaaaactacgtcat
tttaaagaaccaaaaccagcacgagaagtaagtattatttatccaaaaaacgaattaaag
attcaaataattgatgcgttaagaaatacaattgctggcgttgtaaaaggagcaattgtt
ttccagaatgtagaaataattagcccactgcaaaaaaaataa
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