Flavobacterium capsici: RN605_03210
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Entry
RN605_03210 CDS
T10574
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fcj Flavobacterium capsici
Pathway
fcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RN605_03210 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcj03400
]
RN605_03210 (priA)
Enzymes [BR:
fcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN605_03210 (priA)
DNA repair and recombination proteins [BR:
fcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RN605_03210 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Cas3-like_C_2
nSTAND3
Penicillinase_R
TNV_CP
AAA_19
Zn_ribbon_6
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WNM22379
UniProt:
A0AA96J2K8
LinkDB
All DBs
Position
complement(674255..676702)
Genome browser
AA seq
815 aa
AA seq
DB search
MYFIEVIIPLSLSKTFTYKVSEKEYFFLKKGMRVAVPFGKNKVYTALVIDLHQNSPILYE
PKEIHEIIDEKPIVNEIQIKHWFWIASYYMCSIGDVYRGAMPSALLLESETIITQKKDIE
VDEKELTDDEFLIFEALQHQSSLKIQDVIGILNKKTVLPIIQQLISKEVVSLHEEIQEVY
KPKLVKYIRLHPFFEKEEELISLLDSQKSEKRKKIILAFFQLKAQESKPISVKQLLEYSN
ISQSVLKVLIENNVFEEYAIQMDRVNFEENQLDKKLVLSKFQETAFNQIENQFKEKEVCL
LHGVTASGKTEIYIKLIEKFIDDGKQILYLLPEIALTTQLVTRLTEYFGNKVAVFHSKYS
NNERVEVWQNVLKSSETAQIVIGARSALFLPFSNLGFIIVDEEHEQTFKQQDPAPRYHAR
DSAIVLANSFDAKILLGSATPSIETYHNCLSGKYGLVNLKERYSNVPLPEIELIDLKDNY
FRKKMNGHFSFSLIEKITEALSNGEQVILFQNRRGFSPVLECLTCGHIPQCPQCDVSLTY
HKIKNQLRCHYCGYSIAKPSNCHQCSSLDLETKGFGTEQIELELKSLFPEKNIKRMDQDT
TRGKFSFEKIIDGFKNREIDILVGTQMLAKGLDFDNVSLVGILNADNMLYFPDFRAFERS
FQMITQVAGRSGRAEKRGKVIIQTYNPLHNIIQQVTNNDYDGMFKEQLYERKIYNYPPYC
RMIKLTLKHRDFEKVKDGSFWLYQVLKQNLNIPVLGPEEPAVSRIRNEYIRTIIIKIPND
NSLQGTKKTIQKILNSFDMVSQYRAIKVVVNVDNY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtattttattgaagtaattattcctctttcattatctaaaacttttacttataaggtt
tcggaaaaagaatattttttcttgaaaaaaggaatgcgagtagcagttccatttggaaaa
aataaagtttacactgctttagtaattgatttgcatcaaaattcaccaatactttatgag
ccaaaagaaattcatgaaattattgatgaaaaacctattgtaaacgaaattcaaataaaa
cattggttttggattgcttcgtattatatgtgttctattggtgatgtttatcgtggcgca
atgccatcagctttgttattagaaagtgaaactataattacccaaaaaaaggatatagaa
gttgatgaaaaagaattaaccgatgatgagtttttaatttttgaagcgttacaacatcaa
tcttcacttaaaattcaagatgttattggcattcttaacaaaaaaacggttttaccaatt
attcaacaattaataagtaaagaggttgtttcattgcatgaagaaattcaagaagtttat
aaaccaaaacttgtaaaatatataagattgcatcctttttttgaaaaagaagaagaatta
atttcattattagattcacaaaaatctgaaaaaagaaaaaaaataattcttgcttttttt
caattaaaagctcaagaaagcaaacctatttcagttaagcaattattagaatattcaaat
atttcacagtctgtattgaaggtattaattgaaaacaatgtttttgaagaatatgcaatt
caaatggatagagtgaattttgaagaaaatcagcttgataaaaaactagttttaagtaag
tttcaagaaaccgcttttaatcaaattgaaaatcaatttaaagaaaaggaagtttgtctt
ttgcatggagttactgcaagcggtaaaaccgaaatttatatcaagttaattgaaaaattt
atcgatgatggaaaacaaatcctttatttactgccagaaattgcattaacaactcagtta
gtcacaagattgactgagtattttggtaataaagttgctgtttttcattccaaatactct
aataatgaaagagtagaagtgtggcaaaatgttttaaaaagctctgaaactgctcaaata
gttattggcgcaaggtctgctttgtttttgcctttttccaatttgggttttattattgtt
gatgaagaacatgaacaaacatttaagcaacaagatccagcaccaagatatcatgctaga
gattcggctattgttttagcaaattctttcgatgcaaaaattcttttgggttcagcaact
cctagtatagaaacttatcataattgtttgtcagggaaatatggtttggtgaatttaaaa
gaacgatacagtaatgttccgcttcctgaaattgaattaattgacttgaaagacaattat
tttagaaaaaaaatgaatggtcattttagtttcagtttaatagaaaagattactgaggca
ctttcaaatggcgaacaagtaattttatttcaaaatcgaagaggattttcacctgtttta
gaatgcttgacatgcggtcatattccgcaatgtccacaatgtgatgttagtttgacatac
cataaaattaaaaatcaattacgatgtcattattgcggttattcaattgcaaaaccatca
aactgtcatcaatgttcaagtttagatttagaaacaaaaggttttggaaccgaacaaatt
gaacttgaattaaaatctttatttcctgaaaaaaacatcaaaaggatggaccaagacaca
actcgaggaaagtttagttttgaaaaaattattgatggatttaaaaacagagaaatagat
attttggttggaacacaaatgcttgcaaaaggattagattttgacaatgtttcacttgtt
gggattttaaacgctgataacatgctttattttcctgattttagagcttttgaaagaagt
tttcaaatgataacgcaagtagcaggacgatcgggtagagcagaaaaaagaggaaaagtt
attattcaaacatataatccattgcataatattatacagcaagttaccaataatgattat
gatggaatgtttaaggaacaactttatgaacgaaagatttataattatccgccatattgt
aggatgattaaattaactttaaagcatagagattttgaaaaagtaaaagatggttcattt
tggctgtatcaagtattgaaacaaaatttaaatattcctgttcttggtccagaagaacca
gcagtttcaagaattagaaatgaatatatcagaacaataattatcaaaattcctaatgat
aattcattgcaaggcacaaaaaaaactatccagaaaatactgaatagttttgatatggtt
tctcaatacagagcaataaaagtagttgttaatgtcgataattactag
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