Flavobacterium capsici: RN605_04580
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Entry
RN605_04580 CDS
T10574
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
fcj Flavobacterium capsici
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA
AAA_5
AAA_16
AAA_7
bpMoxR
AAA_3
FleQ
AAA_14
nSTAND3
AAA_22
AAA_30
AAA_18
T3S_SPI-1_N0
ResIII
Motif
Other DBs
NCBI-ProteinID:
WNM22640
UniProt:
A0AA96ETV1
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Position
complement(986774..987937)
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AA seq
387 aa
AA seq
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MPKILIIEDEAAIRRVLVKILSEESDTYQVDEAEDGRIGFEKIKNEDYDLVLCDIKMPKM
NGEELLEAVKKIKSEIPIVMISGHGDLETAVNTMRLGAFDYISKPPDLNRLLNTVRNALD
KKQLVVENKILKKKVSKNYEMIGNSAPINQIKEMIEKVAQTDARVLITGPNGTGKELVAH
QLHEKSERSEFPLVEVNCAAIPSELIESELFGHVKGAFTSAVKDRAGKFEAANGGTIFLD
EIGDMSLAAQAKVLRALQENLVQRVGADKDIKVDVRVVAATNKDLKKEIAEGRFREDLYH
RLAVILIKVPALNDRREDIPLLIEHFTAKIAEEQGNTQKAFSKDAVKLLQEYDWTGNIRE
LRNVVERLIILGGSEISETDVKLFASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatcttaattattgaagacgaagcagcaattcgtcgtgtattagtaaaaata
ttatctgaagaaagcgacacctatcaagttgatgaggccgaagatggaagaataggtttt
gaaaaaattaaaaatgaagattacgacttggttctttgtgatataaaaatgccaaaaatg
aatggcgaagaactactagaagccgttaaaaaaataaaatctgaaattccaatcgtgatg
atttcaggtcatggtgatttagaaactgccgttaacactatgcgtttaggtgcgtttgat
tatatatcgaaaccaccagatttgaatagattgttaaatacggttcgcaatgccttggat
aaaaagcaactggttgttgagaacaaaatattaaagaaaaaagtttccaagaattatgaa
atgattggaaattcagcacctatcaatcaaataaaagaaatgattgaaaaagtggcacaa
acagatgctagagttttaattactggtccgaatggaacgggtaaagaattggtagcgcat
caattacatgaaaagagcgaacgttccgaatttccattggttgaggtaaactgtgctgct
attccttcggaattaattgaaagtgaattgtttggtcatgttaaaggtgcttttacttcg
gctgtaaaagatagagctggaaaatttgaagcggctaatggcggaacaatttttttggat
gaaattggagatatgagtttagcggctcaagcaaaagttcttcgtgcattacaagaaaat
ttagtgcaaagagtaggagcagacaaagacattaaagttgatgttcgagtggttgctgca
accaataaagacttgaaaaaagaaattgcagaaggtcgttttagagaagatttataccat
agattggctgtaattttaatcaaagttcctgcgttgaatgatagaagagaagatattccg
ttattaattgagcattttactgccaagattgctgaagaacaaggaaatacccaaaaggca
ttttcaaaagatgcagttaaactattgcaagaatacgattggacaggaaatattcgtgaa
ttgcgtaacgtggtagaacgattaataattcttggaggaagcgaaatttcggaaaccgat
gtaaaactatttgctagcaaataa
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