KEGG   Flavobacterium capsici: RN605_05360
Entry
RN605_05360       CDS       T10574                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
fcj  Flavobacterium capsici
Brite
KEGG Orthology (KO) [BR:fcj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcj03032]
    RN605_05360 (gyrB)
   03400 DNA repair and recombination proteins [BR:fcj03400]
    RN605_05360 (gyrB)
Enzymes [BR:fcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RN605_05360 (gyrB)
DNA replication proteins [BR:fcj03032]
 Prokaryotic type
  DNA Topoisomerases
   RN605_05360 (gyrB)
DNA repair and recombination proteins [BR:fcj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RN605_05360 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: WNM22789
UniProt: A0AA96F3A7
LinkDB
Position
complement(1158895..1160835)
AA seq 646 aa
MSDEIKKNNYSADSIQALEGMEHVRMRPSMYIGDTGVRGLHHLVYEVVDNSIDEALAGHC
DTISVTINEDNSITVEDNGRGIPVDMHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLRATVFREGVIWEQEYERGKAMYPVKQIGTTDKRGTTVTFKPDASIF
TQTLVYSYDTLAGRMRELSFLNKGITINFIDRREVKEDGSFVGEVFHSKEGLKEFVRFLD
GNRVPIISHVISMENEKGEIPVEVALIYNDSYAENIFSYVNNINTHEGGTHLQGFRMGLT
RTLKKYADASGLLEKLKFEISGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVVSPVS
QAVAEMLENYLEENPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVLGGGGLPGKLSDC
SEQDPAKCEVYLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNI
FTALGVTIGTEEDSKALNLEKLRYHKVIIMCDADVDGSHISTLILTFFFRFMKELIENGH
VYIAAPPLYLVKKGNKKEYAWNDVQRDQANERMGGSAAIQRYKGLGEMNAEQLWETTMDP
NFRTLRQVTIDSLAEADRIFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagcgacgagattaaaaagaacaattattcagccgatagtattcaggcattagaagga
atggagcatgttagaatgcgtccatccatgtatattggtgatactggagttagaggttta
catcacttagtttatgaagtagttgataactctattgatgaagctttagctggtcattgt
gatacaattagtgtaacaataaatgaagacaattccattacagttgaagataatggtcgt
ggtattccggtagatatgcacaaaaaagaaggcgtatctgctttggaggttgtaatgacg
aaaattggagctggaggaaaatttgataaagattcgtataaagtttccggaggtttgcat
ggagtaggtgtttcttgtgtgaatgcactttcagaccatttacgtgctacagttttccgt
gaaggtgtaatttgggaacaagagtacgaacgtggaaaagctatgtatccagtaaagcaa
attggaactacagacaaaagaggaacaacggttacttttaagcctgatgcctctattttt
acacagactttggtgtattcttatgatacattagctggacgtatgcgtgaattatctttt
ttgaataaaggtatcacgattaatttcatcgatagaagagaagttaaagaagacggaagc
tttgtgggtgaagtgtttcattcaaaagaaggattaaaagaatttgttcgttttcttgac
ggaaatcgtgtgccaatcatttcgcatgtgatttcaatggagaatgaaaagggtgaaatt
ccggttgaagtagctttgatttataacgattcctatgctgaaaatattttctcatatgta
aacaatattaacactcatgaaggaggaacacatttacaaggattccgtatggggttaact
cgtacattaaaaaaatatgctgacgcttcaggattattagaaaaattaaagtttgaaata
tcaggtgatgatttccgtgaaggtttgactgctattatttctgtaaaagtacaggaacca
caatttgaaggacaaactaaaaccaaacttggtaatagagaagtagtttctccagtttca
caagccgttgcagaaatgttagaaaattatttggaagaaaatccaaatgatgctaaaatc
attgttcagaaagtaattttagcagcacaagcacgtcatgcagcgaaaaaagctcgtgaa
atggtgcagcgtaaaactgttcttggcggcggtggattaccaggaaaattatctgattgt
tcagaacaagatccagcaaaatgtgaagtgtatcttgtcgagggagattcggctggtggt
actgcaaaacaaggtcgtgatcgtaattttcaagctattttaccattacgtggaaaaatt
ttgaatgttgagaaagcaatgcagcataaggtttttgaaaatgaggaaatcagaaacata
tttacagctttaggcgtaactatcggtacagaagaagatagcaaagcattgaatttagaa
aaactgcgttatcataaagtaattattatgtgtgatgctgacgttgatggtagtcacatt
tctaccttaatattaacattcttcttccgattcatgaaagagttgattgaaaacggacat
gtttatatagctgcgccaccattatatttagtgaaaaaaggtaataaaaaagaatatgca
tggaatgatgttcaacgtgatcaagctaatgaaagaatgggtggaagtgctgctattcag
cgttataaaggtcttggagaaatgaatgctgagcaactttgggaaaccacaatggatcct
aacttcagaacattacgccaagttaccattgatagtttagcagaagcagatagaatcttc
tcaatgttaatgggtgatgaagttccgcctcgtagagaatttattgagaaaaatgcggtt
tatgcaaatattgacgcataa

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