Flavobacterium capsici: RN605_06515
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Entry
RN605_06515 CDS
T10574
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fcj Flavobacterium capsici
Pathway
fcj02024
Quorum sensing
fcj03060
Protein export
fcj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RN605_06515 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RN605_06515 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RN605_06515 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fcj02044
]
RN605_06515 (ffh)
Enzymes [BR:
fcj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RN605_06515 (ffh)
Secretion system [BR:
fcj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RN605_06515 (ffh)
Eukaryotic Sec-SRP protein
RN605_06515 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
nSTAND3
CLP1_P
AAA_22
cobW
AAA_33
APS_kinase
AAA_24
KAP_NTPase
AAA_31
6PF2K
ATPase
DUF5693
AAA_18
KTI12
AAA_17
AAA_16
NPHP3_N
TsaE
NACHT
DO-GTPase1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WNM23010
UniProt:
A0AA96J660
LinkDB
All DBs
Position
complement(1403210..1404547)
Genome browser
AA seq
445 aa
AA seq
DB search
MFNNLSEKLDKALHVLKGHGKITEVNVAETLKEVRRALLDADVNFKIAKDFTTRVKDKAI
GENVLTTLQPGQLMVKIVKDELTELMGGDATGINLSGNPSVILMSGLQGSGKTTFSGKLA
NYLKTKKGKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVQIAQNAINHAKS
NGFNVVIVDTAGRLAIDEQMMNEIANVHAAIKPQETLFVVDSMTGQDAVNTAKAFNDKLN
FDGVILTKLDGDTRGGAAISIKSVVDKPIKFIGTGEKMEAIDVFYPARMADRILGMGDVV
SLVERAQEQYDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGAGKALK
DVEIEDDAFKHVEAIIYSMTPQERSKPSIIDMKRKNRIAKGSGRKIEEVNQLMKQFDQMS
KMMKMMQGSGGKNLMRMMGGMKGMR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatttaagcgaaaagttagataaagcattacacgttttaaaaggtcatggt
aaaattacagaagtaaacgttgccgaaaccttaaaagaagtaagacgtgctttattggat
gccgatgtgaattttaaaattgcaaaagattttactactcgtgtaaaagataaagcaatt
ggtgaaaacgtattgactacgttacaaccaggacaattaatggttaaaatcgttaaagac
gaattaaccgaattaatgggtggagacgcaacaggtatcaatctttcaggaaatccatct
gtgattttgatgtcaggtttacaaggttcaggtaaaactaccttttctggaaaattagct
aattatttaaaaactaaaaagggtaaaaaaccacttttagtagcttgtgatatttatcgt
cctgcggcaattaatcagttgcatgtagttggtgaccaaattggtgttgaagtttattct
gaaccagaaaataaaaatccagttcaaattgctcaaaacgcaatcaatcatgcaaaatct
aatggttttaatgttgtaattgtcgatacagcaggtcgtttagctattgatgagcaaatg
atgaacgaaattgctaatgttcatgcggcaattaaaccacaagaaacattatttgtggtg
gattcgatgacaggtcaagatgcggtcaatacagcaaaagcgtttaatgataaattaaat
tttgacggagttattttaaccaaattagatggtgatactcgtggtggagcagcaatttct
attaaatcggtagttgataaaccaattaaattcatcggaactggtgaaaaaatggaagct
attgatgtattttatcctgctcgtatggcagatagaattcttggaatgggtgatgttgtt
tccttagtagaaagagctcaagagcaatacgatgaagaagaagcaagaaaacttcaaaag
aaaattgctaaaaacgaatttggtttcgatgatttcttaactcaaattcaacaagtaaag
aaaatgggtaacatgaaagacttagttggaatgatacctggtgctggaaaagctttgaaa
gatgttgaaattgaagacgatgctttcaaacatgttgaagcaatcatatattcaatgact
ccacaagaaagaagtaagccttctatcattgatatgaaaagaaaaaacagaatcgcgaaa
ggttctggaagaaaaattgaagaagtcaatcaattgatgaaacaatttgaccaaatgagc
aaaatgatgaaaatgatgcaaggttctggaggaaagaatttaatgcgcatgatgggcgga
atgaaaggaatgagataa
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