KEGG   Flavobacterium capsici: RN605_06725
Entry
RN605_06725       CDS       T10574                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fcj  Flavobacterium capsici
Pathway
fcj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RN605_06725 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcj03019]
    RN605_06725 (rny)
Messenger RNA biogenesis [BR:fcj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RN605_06725 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP HTH_37
Other DBs
NCBI-ProteinID: WNM23051
UniProt: A0AA96F0B0
LinkDB
Position
1454101..1455663
AA seq 520 aa
MEITFIILAAIIGIASGFGIAKFLEKSNVSNLIKNAKKEASSILKEANQEAESIKKDKLL
QAKEKFLELKSEHEKEILNKDKKIAEVEKRIRDKESQVSSELAKAKKVNDDFETKTKEYE
SKIELLDKKHQELEKLHKSQVEQLEVISGLSADDAREQLVESLKAEAKTKAMAHIQDTIE
EAKLTAQQEAKKVIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDPVRREIARLSLHKLVTDGRIHPARIEEVVAKTTKQIDEEIA
EVGKRTVIDLGIHGLHPELIKVVGRMKFRSSYGQNLLQHSREVAKLCGIMAAELGLNVKL
AKRAGLLHDIGKVPDTESDLPHALLGMQWAEKYGEKEEVCNAIGAHHDEIEMKYLISPII
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFNGVKNAYAIQAGRELRVIVESEKVS
DEMASSLSFEISQKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggaaattacatttattatactcgccgcaattattggtattgcttctggatttggaatt
gcaaaattccttgaaaagagcaatgtttctaatcttattaaaaatgcaaaaaaagaagca
agttcaattttaaaagaagcaaatcaagaagctgaaagcataaaaaaagataagcttctg
caagcaaaagaaaagtttcttgaattaaaatctgagcacgaaaaagagattttaaacaaa
gacaaaaaaattgctgaagtagaaaaaagaatacgcgacaaagaatcacaagtttcaagt
gaattggcaaaagctaaaaaagtaaatgatgactttgaaacaaaaaccaaagaatacgaa
agcaaaattgaattacttgataaaaagcatcaagaactagaaaaacttcataaaagtcaa
gtagagcaattagaagtcatatctggtctttctgctgacgatgcaagagaacaattagta
gaaagcttaaaagctgaagctaaaactaaagcaatggcgcatattcaagatactattgaa
gaagctaaactgactgcgcaacaagaagccaaaaaagtaattatcaacaccattcaacgt
gttggaactgaagaagctgtcgaaaattgtgtgtcagtattcaatattgaatctgatgat
gtaaaaggaagaattattggtcgcgaaggaagaaatattcgtgcacttgaagctgcaact
ggagtagaaattattgttgacgatacgccggaagcaattattttatcatgttttgatcct
gttagaagagaaattgctcgtttatcattacataaattggttacagacggaagaattcac
ccagcgagaattgaagaagttgtagcaaaaacaactaagcaaattgatgaagaaatagct
gaagttggtaaaagaaccgttattgatttgggtattcacggtttacatccagaattgatt
aaagtagtgggaagaatgaaattccgttcttcttatggtcaaaacttgttacaacactcg
agagaagttgcaaaactttgtggaattatggctgctgaacttggcttaaatgtcaaacta
gctaaacgtgctggtttacttcacgatattggaaaagttcctgatacagaaagcgattta
ccacacgcattattaggaatgcaatgggctgaaaaatatggagaaaaagaagaagtatgc
aacgcaattggagcacaccatgatgaaattgaaatgaaatatttgatttctccgattatt
caggtttgtgatgctatttctggagcgagacctggagcgagacgtcaagttttagattca
tacatacaacgtttaaaagatttagaagatattgcctttggattcaatggtgtgaaaaat
gcttatgcaattcaagcaggaagagaattgagagttattgttgaaagtgaaaaagtatct
gatgaaatggcttcaagtctgtcatttgaaatttcacaaaaaatacaaactgaaatgact
tatcctggacaagtaaaaattactgttattcgtgaaactagagcagtaaatattgcgaaa
taa

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