Flavobacterium capsici: RN605_06725
Help
Entry
RN605_06725 CDS
T10574
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fcj Flavobacterium capsici
Pathway
fcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN605_06725 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcj03019
]
RN605_06725 (rny)
Messenger RNA biogenesis [BR:
fcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RN605_06725 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
HTH_37
Motif
Other DBs
NCBI-ProteinID:
WNM23051
UniProt:
A0AA96F0B0
LinkDB
All DBs
Position
1454101..1455663
Genome browser
AA seq
520 aa
AA seq
DB search
MEITFIILAAIIGIASGFGIAKFLEKSNVSNLIKNAKKEASSILKEANQEAESIKKDKLL
QAKEKFLELKSEHEKEILNKDKKIAEVEKRIRDKESQVSSELAKAKKVNDDFETKTKEYE
SKIELLDKKHQELEKLHKSQVEQLEVISGLSADDAREQLVESLKAEAKTKAMAHIQDTIE
EAKLTAQQEAKKVIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDPVRREIARLSLHKLVTDGRIHPARIEEVVAKTTKQIDEEIA
EVGKRTVIDLGIHGLHPELIKVVGRMKFRSSYGQNLLQHSREVAKLCGIMAAELGLNVKL
AKRAGLLHDIGKVPDTESDLPHALLGMQWAEKYGEKEEVCNAIGAHHDEIEMKYLISPII
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFNGVKNAYAIQAGRELRVIVESEKVS
DEMASSLSFEISQKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaattacatttattatactcgccgcaattattggtattgcttctggatttggaatt
gcaaaattccttgaaaagagcaatgtttctaatcttattaaaaatgcaaaaaaagaagca
agttcaattttaaaagaagcaaatcaagaagctgaaagcataaaaaaagataagcttctg
caagcaaaagaaaagtttcttgaattaaaatctgagcacgaaaaagagattttaaacaaa
gacaaaaaaattgctgaagtagaaaaaagaatacgcgacaaagaatcacaagtttcaagt
gaattggcaaaagctaaaaaagtaaatgatgactttgaaacaaaaaccaaagaatacgaa
agcaaaattgaattacttgataaaaagcatcaagaactagaaaaacttcataaaagtcaa
gtagagcaattagaagtcatatctggtctttctgctgacgatgcaagagaacaattagta
gaaagcttaaaagctgaagctaaaactaaagcaatggcgcatattcaagatactattgaa
gaagctaaactgactgcgcaacaagaagccaaaaaagtaattatcaacaccattcaacgt
gttggaactgaagaagctgtcgaaaattgtgtgtcagtattcaatattgaatctgatgat
gtaaaaggaagaattattggtcgcgaaggaagaaatattcgtgcacttgaagctgcaact
ggagtagaaattattgttgacgatacgccggaagcaattattttatcatgttttgatcct
gttagaagagaaattgctcgtttatcattacataaattggttacagacggaagaattcac
ccagcgagaattgaagaagttgtagcaaaaacaactaagcaaattgatgaagaaatagct
gaagttggtaaaagaaccgttattgatttgggtattcacggtttacatccagaattgatt
aaagtagtgggaagaatgaaattccgttcttcttatggtcaaaacttgttacaacactcg
agagaagttgcaaaactttgtggaattatggctgctgaacttggcttaaatgtcaaacta
gctaaacgtgctggtttacttcacgatattggaaaagttcctgatacagaaagcgattta
ccacacgcattattaggaatgcaatgggctgaaaaatatggagaaaaagaagaagtatgc
aacgcaattggagcacaccatgatgaaattgaaatgaaatatttgatttctccgattatt
caggtttgtgatgctatttctggagcgagacctggagcgagacgtcaagttttagattca
tacatacaacgtttaaaagatttagaagatattgcctttggattcaatggtgtgaaaaat
gcttatgcaattcaagcaggaagagaattgagagttattgttgaaagtgaaaaagtatct
gatgaaatggcttcaagtctgtcatttgaaatttcacaaaaaatacaaactgaaatgact
tatcctggacaagtaaaaattactgttattcgtgaaactagagcagtaaatattgcgaaa
taa
DBGET
integrated database retrieval system