Flavobacterium capsici: RN605_11525
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Entry
RN605_11525 CDS
T10574
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fcj Flavobacterium capsici
Pathway
fcj03030
DNA replication
fcj03430
Mismatch repair
fcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RN605_11525 (dnaE)
03430 Mismatch repair
RN605_11525 (dnaE)
03440 Homologous recombination
RN605_11525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcj03032
]
RN605_11525 (dnaE)
03400 DNA repair and recombination proteins [BR:
fcj03400
]
RN605_11525 (dnaE)
Enzymes [BR:
fcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RN605_11525 (dnaE)
DNA replication proteins [BR:
fcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RN605_11525 (dnaE)
DNA repair and recombination proteins [BR:
fcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RN605_11525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WNM21306
UniProt:
A0AA96EZY3
LinkDB
All DBs
Position
2517760..2522253
Genome browser
AA seq
1497 aa
AA seq
DB search
MYLIFDTETTGLPRNWSAPISDTDNWPRCVQIAWQLHDEMGKLVEHQDYLIKPKGFNIPF
DAERIHGISTELAQHEGHSLQEVLEKFNIALSKAKFIVGQNLGFDINIMGCEFYRMGIDS
AMSQMPVLDTCTEVTAELLKLPGGRGGKFKLPTLTELHEYLFGEKFEEAHNATADVEATT
RCFLELVRKEIFTKEELDVPADYFREFNENNPKEIKLIGLKHINLKEASDKIRQQFGEKG
NVPISKETIKQNQQELIDVDFVHLHNHTQFSVLQSTISVQDLVKAAVKNKMPAVAITDIG
NMMGAFHFVRDVLYHNKSAETKNKIAIENGEEPTETVLKPIVGCEFYVCENHKDKSRKDN
GYQIVLLAKNKKGYHNLAKMSSIAFTEGFYYVPRIDKEVIQKYKEDIIVLSGSLYGEIPN
KLLNIGENQAEEALLWWKEQFQDDFYLELSRHNQEDENRVNNSLIDLARKHNVKTIATNN
IFYINKEDANAHDILLCVRDGEKQVTPIGRGRGFRYGLPNHEYYFKSGEEMKLLFQDFPE
AISNIQEIVDKIEIYDLAREVLLPKFDIPVEFLVEEDKTDGGKRGENAYLRHLTYEGAKK
RYKEITPEIQERLDFELKTIENTGYPGYFLIVQDFIAEARNLEVSVGPGRGSAAGSVVAY
CLWITNIDPLEYDLLFERFLNPDRVSMPDIDIDFDDEGRSKVMDYVINKYGSNQVAQIIT
YGTMAAKSSIRDTARVLDLPLFEADKIAKLIPNLKLDKIFSMEDKALKDALRAEDYEKVK
ELIELANAEDLGSEIIQQAKILEGNLRNTGIHACGVIITPDDITNFVPVTTAKDSDLYVT
QFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIELNPDEFPIDDVKTYELFQRG
ETVGIFQYESVGMQKYLRDLKPTVFGDLIAMNALYRPGPLEYIPSFVKRKNGEEEIVYDL
EANEEYLKETYGITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQKDVLDKMKSKFISQ
AMENGHPEDKLEKIWKDWEAFAQYAFNKSHSTCYAWIGYQTAYLKAHYPAEYMAAVLSNN
MNDIKQVSFFMEECKRMGLNVLGPDVNESFYKFTVNENYAVRFGMGAIKGVGAPAVDTIV
ENRKSAKYKSIFDLAKRIDLRAANKKAFESLALAGGFDGFTETHRAQYFHDEGDGITFLE
KAMRYGAKFQENENSAQVSLFGESSDIQIPEPQVPPCEEWNTMEKLAKEKEVVGIYISGH
PLDDYKFEMKYFCNSRLETLKNLDQFVNKNLTFGGIITNVQHKTAKNGKGWGSFTLEGYD
ESFEFKIFGEEYLKFRHFLIQNNFTFIKVLIREGWINQEGKRGEPRIQFQALQYLQDVLP
QFAKKLIIALDIKELQTELIHKLNSLFQSNKGDNSVTFEVLERETIKVETKPIELISNLD
VNQDEMEFSEETEIEIPEDTKTVTVNKITMPSRKLKIRISNELLSELEKMQINFKLN
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatctttgataccgaaactactggtttacctcgtaattggtctgcgccaatt
tcggatactgataattggccaagatgtgttcaaatagcttggcaattacatgacgaaatg
ggaaaacttgttgaacatcaagattatttaattaaaccaaagggttttaatattccattt
gatgctgaaagaattcatggtatttctaccgaattagctcaacatgaaggtcattcgcta
caagaagttttagaaaaatttaatatagcattaagtaaagcaaagttcattgtaggtcaa
aatttaggtttcgacatcaatattatgggttgcgagttttatagaatgggaattgattct
gcaatgagtcaaatgcctgttttagacacttgtactgaagtaacagccgaattgttaaaa
cttcctggtggacgtggtggaaaatttaaattacctacattaaccgaattacacgaatat
ttatttggcgaaaaatttgaggaagcacataatgcaaccgctgacgttgaagctacaaca
cgttgttttcttgaattagtaagaaaagaaattttcacaaaagaagaacttgatgttcct
gctgattattttagagaattcaatgaaaataatccaaaggagataaaattaattggatta
aagcacattaatctaaaagaagcttccgataaaattcgtcaacagtttggagaaaaaggg
aatgttcccatttctaaagaaactatcaaacaaaatcaacaggaattaattgatgttgac
tttgttcatttgcataatcatacacaattttctgttttacaatctacgatttcagttcaa
gatttggtgaaagctgccgttaaaaataaaatgccagcagttgccattactgatattggg
aatatgatgggtgcttttcattttgttcgtgatgttttatatcacaataaatcagcagaa
acaaagaataaaatagctattgaaaatggagaagaaccaacagaaacggttttaaaacca
attgtaggatgtgagttttatgtttgcgaaaaccataaagacaagtccagaaaagacaac
ggttatcagattgttttgttggcaaaaaataaaaaaggctatcacaatttggcaaagatg
tcatcgatagcttttaccgaaggattttattatgttccaagaattgacaaagaagtaatt
caaaaatataaagaagatatcattgttttatcaggaagtttgtatggtgaaattccaaat
aaacttttaaatattggtgaaaatcaagcagaagaagcattactatggtggaaagaacaa
tttcaagatgatttttacttagaattatcgcgtcataatcaagaagacgaaaaccgtgta
aataattctttaattgacttagctcgaaagcacaatgtaaagacaattgcaacaaataat
attttttacattaataaagaagatgcaaacgcacatgatattttactttgcgttcgcgat
ggcgaaaaacaagtaacaccaattggtcgtggtcgtggttttagatatggattgccaaat
catgagtattattttaaatcaggtgaagaaatgaaacttttgtttcaagactttcctgaa
gccatttcaaatattcaagaaattgtagataaaatagaaatatatgatttagctcgagaa
gttttgcttccaaaatttgatattccagttgaatttttagtcgaagaagataaaacagat
ggaggaaaacgaggtgaaaatgcttatttaaggcatttgacttatgaaggtgcaaaaaaa
cgatacaaagaaataacaccagaaattcaagaacgacttgattttgaattaaaaactatt
gaaaatactggttatccgggttatttcttgatagttcaggatttcattgccgaagcgcga
aacttagaagtttcagttggtccaggtcgtggttctgcagctggttctgttgtggcttat
tgtctttggattacgaatattgatcctttagaatacgatttgctttttgagcgttttctt
aatccagaccgtgtttcgatgcccgatattgatattgattttgatgacgaaggacgaagt
aaagtaatggattatgtaatcaacaagtatggttctaatcaagtggcgcaaattattact
tatggaacaatggccgcaaaatcatctattcgtgatactgccagagttttagatttacca
ttatttgaagccgataaaattgcaaagctaatccccaatttaaaactcgataaaatcttt
tcaatggaagataaagcattaaaagatgctttgcgtgcagaagattatgaaaaagtaaaa
gagttaatagaattagccaatgcagaagatttaggaagtgaaattatccaacaagcaaaa
atattagaaggaaatcttcgtaatacaggaattcatgcctgtggagttattattacacca
gatgatattaccaattttgttccggttactacagcaaaagattccgatttatatgtaact
cagtttgacaattcagtagtagaaagtgccggattattaaagatggatttcttgggctta
aaaacactaacattaataaaagatacggtcaaattagttaagtatagaacaggaattgaa
ttaaatcctgatgaatttccaattgatgatgtaaaaacatacgaactttttcaacgtggc
gaaacggttggaatatttcaatatgaaagtgttggaatgcaaaaatatttacgtgattta
aaaccaacagtttttggcgatttaattgctatgaatgcattgtatcgtcctggaccatta
gagtatattccatcatttgtaaaaagaaaaaatggtgaagaagaaattgtttatgattta
gaagcaaacgaagaatacctaaaagaaacctatggaattacagtttatcaagaacaagta
atgcttttgtcgcaaaaattagctaatttttctaaaggtgatgccgatgttttgcgtaaa
gcaatgggtaaaaagcaaaaggatgttttggataaaatgaagtctaaattcatttcccaa
gccatggaaaacggacatccagaagataaattagagaaaatttggaaagattgggaagct
tttgctcaatatgcttttaataaatcacattcaacgtgttatgcatggattggttatcaa
actgcatatttaaaggcacattatccagctgaatatatggcagcagttttgtcaaataac
atgaatgatataaagcaagtttcattctttatggaagaatgtaaacgaatggggttaaac
gttcttggaccagatgtaaatgaaagtttttacaagtttacggtaaatgaaaattatgct
gtccgatttggaatgggtgcaataaaaggtgttggtgcgccagcagttgatactattgta
gaaaacagaaaatcagcaaaatacaagtctatttttgatttagcaaaacgtattgatttg
cgagcagctaataaaaaagcatttgaaagtttagcgcttgctggtggttttgatggattt
acagaaacgcatcgtgctcaatattttcatgatgaaggcgatggaattacgtttttagaa
aaggcaatgcgctatggtgcaaaattccaagaaaacgaaaattcagctcaagtaagtttg
tttggtgaaagtagtgatattcaaattcccgaacctcaagttccgccttgtgaagaatgg
aatactatggaaaaactagccaaagaaaaagaagtagttggaatttatatttcaggtcat
ccattagatgattataaatttgaaatgaaatatttctgtaattcaagacttgaaacactt
aaaaatttagaccaatttgtcaataaaaatctaacttttggaggaataattaccaatgtt
caacataaaactgccaaaaatggaaaaggttggggaagttttactttagaaggttatgat
gaaagttttgaattcaaaatttttggcgaagaatatttaaagttcagacattttttaatt
caaaacaattttacatttatcaaagtattgattcgtgaaggttggattaatcaagaagga
aagcgtggtgaaccaagaattcagtttcaagcactacaatatcttcaggatgttttgcct
caatttgcaaaaaaattaattattgctttagatattaaagaattacagacagaattgata
cataaattgaatagtttattccaaagtaataaaggcgataattcggtaacttttgaagtg
ttagaaagagaaaccatcaaagttgaaacaaaaccaattgaactaatatcaaacttagat
gttaatcaggatgaaatggagttttcagaagaaactgaaatagaaattccagaagacacc
aagactgttacggttaataaaatcactatgccaagtagaaaacttaaaataagaatttca
aatgagctgctatcagaactagaaaaaatgcaaattaactttaaattgaactga
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