Flavobacterium capsici: RN605_12985
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Entry
RN605_12985 CDS
T10574
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fcj Flavobacterium capsici
Pathway
fcj00300
Lysine biosynthesis
fcj00470
D-Amino acid metabolism
fcj01100
Metabolic pathways
fcj01110
Biosynthesis of secondary metabolites
fcj01120
Microbial metabolism in diverse environments
fcj01230
Biosynthesis of amino acids
Module
fcj_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fcj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RN605_12985 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RN605_12985 (lysA)
Enzymes [BR:
fcj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RN605_12985 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
Motif
Other DBs
NCBI-ProteinID:
WNM21584
UniProt:
A0AA96JAJ3
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All DBs
Position
complement(2858957..2860162)
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AA seq
401 aa
AA seq
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MQTKDLLELTKEFGNPLYVYDAEKIESQYKRLTKAFSKVEKLRINYAMKALSNVSVLKLL
NNLGSGLDTVSIQEVHLGLHAGFTPDKIIFTPNGVSFEEIEEVAKLGVQINIDNLSVLEH
FGTKHPKTPVCIRINPHVMAGGNSNISVGHIDSKFGISVHQLPHLLRIVENTKMTINGIH
MHTGSDILDIEVFLYAAEILFNTAKHFKNLEFLDFGSGFKVPYKKDDIETDIEELGKKLS
KRFVEFEKEYGSKLTLAFEPGKYLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPM
FYGSQHVIENISNPKGKERFYTVVGYICETDTFANNRRIAEIHEGDVLCFRNAGAYCFSM
SSNYNSRFKPAEVLWKNGKGHLIRERQTMDDILKNQIMVEV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgaaagacttacttgaactgaccaaagaatttggtaacccactttatgtttat
gatgccgagaagattgaatctcaatacaaacggttaactaaggcgttctcgaaggttgaa
aagttacgcattaactatgctatgaaagcattgtctaacgtttcggtgcttaaattatta
aataatttaggttctggcttagatacggtttctattcaggaagtacacttaggcttgcat
gctgggtttactccagataaaattatcttcactccaaacggtgtttcgtttgaagaaatt
gaagaagtagcaaagctgggtgttcaaatcaatattgataacctatcggtgttggaacac
ttcggaacgaaacatccaaaaacacctgtttgtatccgaatcaatcctcacgttatggct
ggcggaaatagcaacatttccgtaggtcatatcgacagtaaatttggaatttcggtacat
cagttgcctcacttgttgcgtattgttgagaataccaaaatgaccatcaacggaatccac
atgcacacgggttctgacattctggacattgaagtattcctgtatgctgcggaaatttta
ttcaacacggctaaacatttcaaaaaccttgaattccttgattttggttcaggattcaaa
gtgccttataaaaaagacgatattgaaaccgatattgaagaactgggtaaaaaattatct
aaacgcttcgtagaattcgaaaaagaatatggcagcaaattaacccttgctttcgaacct
ggtaaatacctagtaagcgaagcgggttacttcctggcaaaagtaaacgtggtaaaacaa
actacctcaacggtttttgcgggtatcgatagcggattcaatcacttgattcgtcctatg
ttctacggttcgcaacacgtaatcgaaaatatctcaaacccaaaaggtaaagaacgtttc
tatactgtagtaggttatatctgcgaaaccgatacgtttgccaacaaccgcagaattgcc
gaaatccacgaaggcgatgtactttgtttccgcaatgctggtgcttactgtttctcaatg
tcttctaactacaactcgcgtttcaaaccagccgaagtattgtggaaaaacggaaaaggt
cacttaatccgtgagcgtcaaacgatggatgacattttgaaaaatcaaattatggttgaa
gtttag
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