Frederiksenia canicola: A4G17_02440
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Entry
A4G17_02440 CDS
T06481
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fcl
Frederiksenia canicola
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcl03009
]
A4G17_02440 (rimO)
Enzymes [BR:
fcl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A4G17_02440 (rimO)
Ribosome biogenesis [BR:
fcl03009
]
Prokaryotic type
ribosomal protein modification factors
A4G17_02440 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Sigma54_CBD
ACP_syn_III
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QIM64386
UniProt:
A0AAE6X562
LinkDB
All DBs
Position
510258..511589
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AA seq
443 aa
AA seq
DB search
MNSTPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYEGADLVIVNTCGFIDSAVQES
LESIGEALENNGKVIVTGCLGAKENQIREVHPQVLEITGPHSYEAVMTHVHKYVPKPEYN
PYVNVVPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRSIVQVLDEAKRLVE
AGVKEILVVSQDTSAYGLDKKKENATKTVFWNGMPIKNDLITLCEQLGSLGAWVRLHYVY
PYPHVDNLIPLMASGKILPYLDIPLQHASPKILKAMKRPGSIDRTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQLLLDFLQEAQLDRVGCFKFSPVDGAVATDMPDQVPEEVKEER
FHRFMQLQQQISANRLQQKVGRTLSVIIDEIDDEGIIGRSMADAPEIDGMVYIDNLSEKE
VKVGQIIEVKITNADEYDLWGTC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaacgccaaatattggttttataagtttaggctgcccgaaaaaccttgtggat
tctgaacgaattttaacggaattacgtgccgatggttacaacattatcccaagctatgaa
ggggcggatttagtgattgtaaacacttgtggttttattgatagtgcggtgcaagaatca
ctggaatctatcggcgaagccttggaaaacaacggcaaagtgattgtgactggctgcctt
ggggcgaaagagaaccaaattcgtgaagtgcatccgcaagtgttggaaattacaggtcca
cacagctatgaagcggtgatgactcatgtgcataaatatgtgccgaagcctgaatataac
ccttatgtgaatgtcgtgccaaaacagggcgtgaaacttaccccgaaacattatgcttat
ttgaaaatttctgaaggttgcgatcaccgttgcacgttctgcattattccgtctatgcgt
ggcgacttagatagccgttcgattgtgcaagtgctagacgaggccaaacgccttgtagaa
gcgggtgtgaaagaaatcttggtggtgtcgcaagatacgtctgcttatggcttagataag
aaaaaagaaaatgcgacgaaaacggtgttttggaatggtatgccgatcaaaaatgatttg
atcaccctttgcgaacagcttggctcgctcggggcttgggtgcgtttgcattatgtgtat
ccgtatccacacgtggataatctcattccattgatggcaagcggtaaaattttgccgtat
ttggacattccactccaacacgccagcccgaaaatcttaaaggcaatgaagcgtccaggt
tccattgatcgcaccttagaacgcattaagaaatggcgtgaaatttgccctgaattgact
ttgcgttcaacattcattgttggcttcccaggtgaaacagaagaagatttccaactgttg
ctcgatttcttacaagaagcacagctcgatcgcgttggttgctttaaattcagccctgtg
gacggtgcggtagcgacagatatgcccgatcaagtgccagaagaggtgaaagaagaacgt
ttccaccgttttatgcagctgcaacagcaaatttcagcgaaccgcttgcaacaaaaagtg
ggcagaaccttgtctgtgattattgatgaaattgatgacgaaggtattatcggtcgctca
atggcggacgcccctgaaattgatggtatggtgtatatcgataatttgtcagaaaaagag
gtgaaagtcggtcaaattatcgaagtcaaaattacaaacgcagacgaatatgatctgtgg
gggacatgttag
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