Frederiksenia canicola: A4G17_03300
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Entry
A4G17_03300 CDS
T06481
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
fcl
Frederiksenia canicola
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcl02000
]
A4G17_03300
Transporters [BR:
fcl02000
]
Other transporters
Pores ion channels [TC:
1
]
A4G17_03300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
OprF
Porin_2
DUF6268
DUF2624
Motif
Other DBs
NCBI-ProteinID:
QIM64536
UniProt:
A0AAE6X5G0
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All DBs
Position
670456..671553
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AA seq
365 aa
AA seq
DB search
MKKSLIALAVSGFAIASVQAAPQANTFYVGAKAGWATFHNDINQFDSKYAGDSRYDLAVG
GGYGVNRHSVTYGVFGGYQIIDNLAVELGYDYFGRVRGNENEFRAFKHSAHGTHLSLKPS
YELVKDLDVYGKVGAALIRNDYKYYSKTKETNKYHNLKTSLLLGAGVEYAILPELAVRLE
YQWLSRIGNEDKAFAKGGVPNTNENYSPDSHSVAIGLSYRFGQGAAPVAAPEVVTKNFAF
SSDVLFDFNKANLKSSAASALDAAHTEINALGLANPAVQVAGYTDRIGSEAYNLKLSQKR
AETVANYIVSKGVNPANVTAVGYGKANPVTGNTCDAVKGRKALIACLAPDRRVEIQVQGS
KEVVM
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctttaattgcattagcagtttctggtttcgcaattgcttctgttcaagca
gctccacaagcaaacactttctatgttggtgctaaagcaggttgggcaacattccacaat
gacatcaaccagtttgattctaaatacgctggtgattcacgttatgaccttgcagtaggt
ggaggctatggtgttaatcgtcactcagtaacttacggtgtatttggtggttatcaaatc
attgataacttagctgttgagttaggttacgattactttggtcgtgtacgtggcaacgaa
aatgaattccgtgcattcaaacactctgctcatggtacacatttaagtctgaagccaagt
tatgaacttgttaaagacttagatgtttatggtaaggttggagctgcattaattcgtaat
gactataaatactatagtaaaacaaaagaaacgaataaatatcataatttaaaaacttct
ctacttttaggtgctggtgttgaatatgcgattcttcctgagttagcagtacgtttagaa
taccaatggttaagccgtattggtaatgaagataaagcttttgctaaaggtggtgttcca
aatacaaatgaaaattatagcccagattcacactctgtagctatcggtttgtcttaccgc
ttcggtcaaggtgcggcgccagttgcagctccagaagttgttactaaaaacttcgcattt
agctcagatgtattgtttgacttcaacaaagcaaacttaaaatcatcagcagcttctgcg
ttagatgcagctcacaccgaaatcaacgcattaggtttagctaacccagctgtgcaagtt
gctggttacactgaccgtatcggtagcgaagcatacaacttaaaactttctcaaaaacgt
gctgaaactgtagctaactacatcgtttctaaaggcgttaatccagctaacgtaactgcg
gtaggttacggtaaagctaacccagtaactggcaacacttgtgatgcggttaaaggtcgt
aaagcacttatcgcttgtttagcaccagaccgtcgtgttgaaatccaagttcaaggttct
aaagaagttgttatgtaa
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