Frederiksenia canicola: A4G17_03900
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Entry
A4G17_03900 CDS
T06481
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fcl
Frederiksenia canicola
Pathway
fcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4G17_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcl03400
]
A4G17_03900
Enzymes [BR:
fcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A4G17_03900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A4G17_03900
DNA repair and recombination proteins [BR:
fcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4G17_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_ACC
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIM64635
UniProt:
A0AAE7C1R3
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All DBs
Position
801627..802451
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AA seq
274 aa
AA seq
DB search
MPELPEVETSVRGVSPYLVGQTIEQIIVRQKQLRWLVSDELNQMNGATILSIYRRAKYLI
IHTNRGDILVHLGMSGSLGILSKAQNQPIGKHDHVDLVTSNGTMLRYNDPRKFGAWLWVD
NAENAALLAKLGPEPLSETFTADYLYQQSRHKTVAVKNFIMNNAVVVGVGNIYACESLFM
AGIHPELAAQNLKRKQCERLVTVIKDVLTKAIIQGGTTLKDFIQPDGKPGYFAQVLQVYG
RKGEECNDCGSIIEAKVIGQRNSFYCPKCQTLPK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacccgaagttgaaacgagtgtgcgaggggtgtcgccttatttggtcggg
cagacgatcgaacagatcattgttcgccaaaagcagttgcgttggttggtaagtgatgaa
cttaatcaaatgaatggggcgacgattttgtcaatttaccgccgtgcgaaatacctcatt
attcataccaatcgtggcgatattttggtgcatttagggatgtcgggatcgctcgggatt
ttgtccaaagcacaaaatcagccgatcgggaaacacgatcatgtcgatctggtaacgagc
aacggcacgatgttacgctataacgatccgcgaaaatttggagcgtggttgtgggtggat
aatgccgaaaatgcggcactgttagcgaaacttggacctgaaccgctttcagagactttc
actgcggactacctttatcaacaaagtcgccataaaacggtagcggtaaaaaatttcatt
atgaataatgcagtggtggttggcgtgggcaatatttacgcctgtgaatcgctatttatg
gcgggcattcaccctgagcttgcggcacaaaatcttaaacggaaacagtgcgagcgtttg
gtgacggtgatcaaagatgtgctaaccaaagcgattattcaaggcggcacaacgttgaaa
gatttcatccaacctgacggcaaaccaggctacttcgctcaagtgctgcaagtttacgga
cgcaaaggcgaagagtgcaacgactgtggttcgatcatcgaagcaaaagttatcgggcaa
cgcaacagtttttattgtccaaagtgccagacattgccgaagtag
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