Frederiksenia canicola: A4G17_05260
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Entry
A4G17_05260 CDS
T06481
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcl
Frederiksenia canicola
Pathway
fcl03420
Nucleotide excision repair
fcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4G17_05260
03430 Mismatch repair
A4G17_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcl03400
]
A4G17_05260
Enzymes [BR:
fcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G17_05260
DNA repair and recombination proteins [BR:
fcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4G17_05260
MMR (mismatch excision repair)
Other MMR factors
A4G17_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF4391
Motif
Other DBs
NCBI-ProteinID:
QIM64884
UniProt:
A0AAE6X6P0
LinkDB
All DBs
Position
complement(1080341..1082521)
Genome browser
AA seq
726 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPEGNILAV
TFTNKAAAEMRHRIEFTLSQATTQRLFGMWVGTFHSIANRLLRSHYLDANLPQDFQIMDS
EDQIRLLKRLLKLHNIDEKYYPPKQVAWFINAQKDKGLRAEKVQVDDENGQKLVQIYQIY
QDACDRAGLVDFAELLIRTYELLKFNPLILQRYQQRFRQILIDEFQDTNNIQYDLIRLLA
GETGNVMIVGDDDQSIYGWRGAQVENIQRFLNDYPKAETIRLEQNYRSTGHILGSANALI
ANNENRLGKNLWSDNGNGEPVDIYCAFNELDEARFVAAQIKQWKEDEGELSDCAVLYRSN
SQSRVIEEALIQASIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPRS
IGERTLDTLRQLTRTRQITLWQAIQIAVNEQHLSGRSASALLRFVELINALEQETEQMPL
FEQTDFVIKKSGLYDMYKQEKGEKGEVRIENLEELVSAAREFNKPDEAEEMSDLTAFLTH
ASLEAGEAQASPHQDYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSHDPDRLQEERRL
AYVGITRAKRKLTISYAESRRLYGKEERHIPSRFIAELPEEHIREVRLRGNINRPASFGF
AKNSPKPTACLNDSDWKMGQKVLHSKFGQGTIINVEGSGEQTRLQIAFVQQGIKWLIAKV
AKLERV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattactggatggattgaacgataaacagcgagaagcggtagcagca
ccacttggcaactatttggtattggcgggagcggggagcggcaaaacacgggtactgacc
caccgtattgcgtggttgattggcgtagaaaatgtgccagaaggcaatattttagcggtt
acctttaccaacaaagctgccgccgaaatgcggcatcgaattgagtttacgctatcgcaa
gccaccacacaacgcctatttggtatgtgggttggtactttccatagcattgctaaccgc
ttgttgcgttcgcactatcttgacgccaacctgccgcaagattttcagattatggacagc
gaagatcaaattcgcctgctcaaacgcttactcaaactgcataatattgatgagaaatac
tatccgccaaagcaagttgcgtggtttattaatgcccaaaaagataaaggattacgggcg
gaaaaagtgcaagtggacgatgaaaatggtcaaaaattggtgcagatttaccaaatctat
caagatgcgtgtgatcgtgcaggtttggttgatttcgccgaattgctgattcgtacctat
gaattattgaaatttaacccattgattttgcaacgttatcagcagcgtttccgccaaatc
ctgattgatgaattccaagacaccaacaatattcaatacgatttaatccgcttgcttgct
ggcgaaacgggtaatgtgatgattgttggcgatgatgaccaatcgatctacggttggcgt
ggtgctcaagtcgaaaatatccaacgctttttgaacgactacccgaaagccgaaacgatt
cgtcttgaacaaaactaccgctcgacagggcatattttaggttcggcaaatgcgttaatt
gccaacaatgaaaatcgcttaggtaaaaatctctggagcgacaatggtaatggagaacct
gtcgatatttattgtgctttcaatgagttagacgaagcccgtttcgttgctgcccaaatc
aaacagtggaaagaagacgaaggtgagctgagtgattgtgcggtgctgtatcgcagtaat
agccaatcccgtgtgattgaagaagctttaatccaagccagtattccttatcgcatttac
ggcggcatgcgattctttgaacggcaagagattaaagatgccttggcgtacctgcgttta
atcgccaatcgccaagacgatgccgcttttgaacgggtggtcaatacgccaccacgtagc
atcggcgaacgcacgctcgacaccttacgccagctcactcgaacccgccaaatcaccctg
tggcaagcaattcaaatagcagtgaatgagcagcatctttctggacgatccgcttccgct
ttgctacgttttgttgaactcatcaacgctttagagcaggaaacggaacagatgccattg
tttgaacagaccgactttgtgatcaaaaaatcggggctgtatgacatgtataagcaagaa
aaaggcgaaaaaggtgaagtacggattgagaacttagaagagctcgtctccgctgcccgt
gaatttaacaaacctgatgaagcggaagagatgagtgatctcactgctttcttaacccat
gcctcgctcgaagcgggtgaagctcaagcctctccgcatcaagattacgtggagttgatg
acccttcattccgccaaaggtttggaatttccacgggtatttatggttggggtggaagaa
gggattttcccaagcggaatgagccatgatccagaccgcttgcaagaagaacgccgcttg
gcgtacgttggtattactcgtgcaaaacgtaaactgacgataagctatgccgaaagccga
cgtttgtatggcaaagaagagcgacatattccatcccgtttcatcgccgaattgcctgaa
gagcacattcgagaagttcgattaaggggcaatatcaaccgtccagccagtttcggattt
gcaaaaaattcgccgaaaccgaccgcttgtttaaacgatagcgactggaaaatggggcaa
aaagtgctgcatagtaaatttggccaaggcaccattatcaacgtggaaggcagtggcgag
caaactcgcttgcaaatcgcctttgtgcagcaaggtattaagtggcttatcgctaaagtg
gctaaactggagcgagtgtaa
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