Frederiksenia canicola: A4G17_05270
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Entry
A4G17_05270 CDS
T06481
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fcl
Frederiksenia canicola
Pathway
fcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G17_05270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcl03019
]
A4G17_05270
03110 Chaperones and folding catalysts [BR:
fcl03110
]
A4G17_05270
03029 Mitochondrial biogenesis [BR:
fcl03029
]
A4G17_05270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcl04147
]
A4G17_05270
Enzymes [BR:
fcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A4G17_05270
Messenger RNA biogenesis [BR:
fcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A4G17_05270
Chaperones and folding catalysts [BR:
fcl03110
]
Heat shock proteins
HSP60 / Chaperonin
A4G17_05270
Mitochondrial biogenesis [BR:
fcl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A4G17_05270
Exosome [BR:
fcl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A4G17_05270
Exosomal proteins of other body fluids (saliva and urine)
A4G17_05270
Exosomal proteins of breast cancer cells
A4G17_05270
Exosomal proteins of colorectal cancer cells
A4G17_05270
Exosomal proteins of bladder cancer cells
A4G17_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QIM64886
UniProt:
A0AAE6X6P2
LinkDB
All DBs
Position
complement(1083433..1085076)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNEARVKMLNGVNVLADAVKVTLGPKGRNVVLDKAFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVTAVVEELKTLSKPCETAKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDG
TGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELDNPYILLVDKKISNIREILPVLEAV
AKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEELGQAKRVVISKDNTTIIDGIGDEAQIKGRVAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAASKVAGILKGDNEEQNVGIRLALRAMEAPLRQIVTNAGEEASVVARNVKDGNGNYGYN
ASTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKDEKADLGAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaaaatttggtaacgaagcacgcgtaaaaatgttaaacggcgtg
aatgtattagcggacgccgtaaaagtgactttaggtccgaaaggtcgtaacgtggtatta
gacaaagcctttggtgcaccaacaatcacaaaagatggtgtatctgtggctcgtgaaatc
gaattagaagataaattcgaaaatatgggtgcccaaatggtgaaagaagtggcatcaaaa
gcaaacgatgcggctggtgatggcaccacaaccgcaaccgtgcttgctcaagcaatcgtt
aatgaaggcttaaaagcggttgcggcgggtatgaacccaatggatttaaaacgtggtatt
gataaagcggtgactgcggtcgttgaagagttaaaaaccttatctaaaccgtgtgaaaca
gcgaaagaaattgaacaagttggtacaatttctgcaaactcggatgaaactgtcggtaaa
ttaattgcacaagcgatggaaaaagtcggcaaagaaggcgtgattaccgtcgaagacggc
acaggtttagacgatgccttagatgtagttgaaggtatgcagtttgatcgtggctactta
tcgccatatttcatcaacaaaccagaagcaggcactgttgaattagataatccatatatc
ttattagtcgataaaaaaatctctaacattcgtgaaattttacctgtgttagaagcagta
gcaaaagcaggcaaaccgctattaattattgctgaagatattgaaggtgaagccttagca
actttagtcgtgaacactatgcgtggtatcgtgaaagtggctgcggtaaaagcccctggc
tttggtgaccgtcgtaaagcgatgttacaagatattgcaattttaaccgcaggtaccgtg
atttcagaagaaatcggtatggaattagaaaaagcgactttagaagagcttggtcaagca
aaacgtgtcgtgatttctaaagataataccaccatcattgacggtatcggtgatgaagca
caaattaaaggtcgtgtcgcacaaattcgtcagcaaattgaagattcaacgtctgattac
gataaagaaaaacttcaagagcgtgttgcaaaacttgctggcggtgtcgcagtaatcaaa
gtgggggcagcgactgaagttgcaatgaaagagaaaaaagatcgtgttgatgatgcttta
cacgcaactcgtgcagcggtggaagaaggtatcgttgcaggcggcggcgtggcattagtg
cgtgccgcaagcaaagtcgctggtatattaaaaggcgataatgaagaacaaaacgtgggt
atccgcttggcacttcgtgcgatggaagcaccacttcgtcaaatcgtcaccaacgcaggt
gaagaagcctccgtcgtggctcgcaacgtgaaagatggcaacggtaactatggttacaat
gcttcaacagaacaatacggcgatatgctcgaaatgggtattttagatccaactaaagtc
actcgttcagcattacaattcgcagcatctatcgcagggttaatgatcaccaccgaatgt
atgatcacagaccttccaaaagatgaaaaagccgacctaggcgctggcatgggcggtatg
ggtggaatgggcggtatgatgtaa
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