Frederiksenia canicola: A4G17_09755
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Entry
A4G17_09755 CDS
T06481
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fcl
Frederiksenia canicola
Pathway
fcl03030
DNA replication
fcl03430
Mismatch repair
fcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4G17_09755
03430 Mismatch repair
A4G17_09755
03440 Homologous recombination
A4G17_09755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcl03032
]
A4G17_09755
03400 DNA repair and recombination proteins [BR:
fcl03400
]
A4G17_09755
Enzymes [BR:
fcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4G17_09755
DNA replication proteins [BR:
fcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4G17_09755
DNA repair and recombination proteins [BR:
fcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4G17_09755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIM65711
UniProt:
A0AAE6X8E0
LinkDB
All DBs
Position
2058876..2062352
Genome browser
AA seq
1158 aa
AA seq
DB search
MSQPRFVHLKVHSDFSMIDGLAKVKPLVKACVTNNMVAMALTDFTNFCGLVRFYGEALGS
GVKPIVGVDVMVRPEPESEEFFELTLLAKNNTGYHNITLLISRAYQQGYFEFPVVEKAWL
SELAEGIIVLSGGRHGDVGKALLKENQAEAESLLHFYQTHFPNHYYLSLCRTGRLDEERY
IQQAVRFAQRFTIPVVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPQQYFR
SEEEMCALFADLPQALENTIKIAQRCNVTIRLGEYFLPNFPTGELSTEDYLVQKSREGLE
ERLEFLFPDPEERANKRSVYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVSET
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPPDPGMTLEKAFGVEPKL
QELYDSDEEVEALIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSQGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINARLAKEGKEPVRIESIPLDDEKAFKLLK
AAKTTAVFQLESRGMKDLISRLQPSNFEDIIALVALFRPGPLEAGMVQNFIDRKHGKEPI
SYPDAQYQHEWLQPILEPTYGIIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
AQRAIFEKGAVEKGVNGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSELDNTDKIVGFYDECINMGLTVVPPDINSGKHRFSVNEKGEIVYGLGAIKGV
GEGPIDAILEARNQDGIFKDLFDLTARVDLRKVNRRTFEGLIMAGAFDKLGPHRAALMKN
LEDALKASDQHSKMEALGQSDMFGVLTETVEEVQNAYANTPKWTEQAVLEGEKNTLGLYL
SGHPVGRFLKELSHYAPARLNELQPTYRGQVATVAGLVMASRIAVTKKGNRIGIATIEDR
SGKLDITLFSEALENFGHLLQKDNIIIASGSIQFDDFSGGLKMSAREVISLDEARERFAK
SLALAIHQEQLNPSFIKQLKSIIEPHKDGILPLHFYYQSPEGRALLKGGIEWRVTPKEEM
LTALKSLLGENAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccccgttttgtacatcttaaagttcacagtgacttctcaatgattgatggc
ttagccaaggtgaagcctttggtgaaagcctgcgttaccaacaatatggtggcaatggca
ttgaccgacttcaccaacttttgcgggttggtgcggttttatggcgaggctctgggttcg
ggagtgaaaccgattgttggggtagatgtgatggttcgccctgagcctgaaagtgaagaa
ttttttgagctgacactactcgccaaaaataatactggctatcataacattacgcttttg
atttccagagcttatcagcaaggctattttgagtttcccgtggtggaaaaagcgtggttg
tcggaactcgcagaaggtatcattgtgctgtctggcggccgccatggcgatgttggcaaa
gcgttattaaaagaaaatcaagcagaagccgaaagcctgcttcacttctaccaaacccat
tttccaaaccattattacttgtccctctgtcgtacaggacggttggacgaagaacgctat
attcaacaagcggtcagattcgctcaacgttttacaattccagtggtggcggtgaatgat
gtcgtgttcttgaaagaagacgattttgatgcccacgaaattcgcgtagcgatccacgac
agctacaccttagatgatccaaaacgcccaaaaaaatactcacctcagcaatatttccgt
agcgaagaggaaatgtgtgcattattcgccgatttaccacaagcgcttgaaaatacaata
aaaattgcccaacgctgtaatgtcaccattcggttaggcgagtactttttgccgaatttc
ccgacaggcgagctttctactgaagactatttggtgcagaaatctcgagaagggttggaa
gaacgattggaatttctgttccccgatcctgaagaacgagccaacaagcggtcagtttat
gacgaaagattgcaaatcgaactggacgtgatcaaccaaatgggcttccctggttacttc
ctgatcgtgatggagtttattcaatggtcgaaggataacgacattcccgtaggtcctggg
cgtggttcaggggcagggtcgctagttgcctatgcgttaaaaattaccgatttagaccca
cttgaatttgatttgcttttcgaacgcttcttaaatccagagcgggtttcaatgcccgat
tttgacgtggacttctgtatggacgggcgagatcgggtgatcgaacacgtttctgaaact
tatggtcgccaagcggtatcgcaaattatcacctttggtacgatggcggcgaaagccgtc
attcgtgatgtagggcgagtgcttgggcacccatatagctttgttgatcggatttccaaa
ctcattccaccagaccctggtatgacgttagaaaaagccttcggggttgagcccaaattg
caagagctgtacgacagcgatgaagaagtcgaagcgttgattgatatggctcgcaaactg
gaaggcgtcacccgcaacgcaggcaaacacgcaggcggcgtagtgattgctccgacagcg
atcaccgatttctcaccgctttattgcgactcacaaggcttacaccctgttacccatttc
gataaaaacgatgtggaatacgccggtttagtgaagttcgactttttgggcttacggaca
ctgaccatcatcaaatgggcattagaaatgatcaatgcccgccttgctaaagaaggcaaa
gagccagtacgaattgaaagcattccccttgatgatgaaaaggcattcaaactacttaaa
gcggcgaaaaccactgcggtattccagctcgaatctcgcggtatgaaagaccttatttct
cgcctacaaccgagtaactttgaagatattattgcgttagtcgcactgtttcgccctggc
ccgttagaggcaggaatggtgcagaactttatcgaccgcaaacacggcaaagaaccgatt
tcttaccctgatgctcaatatcagcacgaatggctgcaaccgattttagaacccacttat
ggcattatcgtttatcaagagcaggtaatgcagatcgcacaagtgttagcgggttatacc
ctcgggggggcagacttgctacgacgtgcgatgggtaagaaaaaacccgaagaaatggca
gcccagcgagcaatttttgaaaaaggggccgtagaaaaaggcgttaatggcgagttggcg
atgaaaatcttcgacttagtggaaaaatttgccggctacggctttaacaaatcccactct
gccgcttatgcattagtttcctaccagaccttgtggctcaaagcccactaccctgcggaa
tttatggcagcagtaatgacttcggaattggataataccgataaaatcgttggcttctat
gatgaatgtatcaatatgggcttaaccgtcgtgccgccagacatcaacagtggtaaacac
cgtttcagcgtaaacgaaaaaggagaaattgtgtacggcttaggggcaatcaaaggcgtg
ggtgaaggcccgattgatgcgattttggaagcccgtaaccaagacggtattttcaaagat
ctgttcgatctcaccgcacgggtggatctgcgtaaagtcaatcgccgtacctttgaaggc
ttaattatggcgggtgcctttgacaaactcggaccgcaccgtgccgcactaatgaagaat
ttggaagatgctctcaaagcctccgatcaacacagcaaaatggaagccttggggcaaagc
gatatgttcggcgtgctgaccgaaaccgtggaagaagtgcaaaacgcctacgccaacacg
ccaaagtggactgaacaagcggtgctagaaggcgaaaaaaataccttagggctctatttg
agtgggcatcctgttgggcggttcttaaaagaactttcccactatgcccccgcacgcttg
aatgaattgcaaccaacttatcgtggccaagtggcaacggtagcgggtttagtaatggct
tcacgcattgcggtcacgaaaaaaggcaaccgcatcggcattgccaccattgaagaccgc
tctggcaagttggatattaccctgttttctgaagccttggaaaattttgggcatttgctt
cagaaagacaatatcattatcgccagtggttccattcagtttgatgacttcagtggtggc
ttgaaaatgtcggctcgagaagtaatttcactcgacgaagcccgtgagcgatttgccaaa
agcctcgcccttgcgattcaccaagagcagctaaacccaagttttatcaaacagctgaaa
tccattatcgaaccacacaaagatggcattttaccgctacatttctactaccaaagtccc
gaagggcgagccttactcaaaggcgggatagaatggagagtaacgccaaaagaagagatg
ctcactgccttaaaatccctgcttggcgaaaatgcggtggagttagaatttgaatag
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