Fructilactobacillus cliffordii: M3M38_00370
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Entry
M3M38_00370 CDS
T08843
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fcli
Fructilactobacillus cliffordii
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcli03016
]
M3M38_00370 (truB)
Enzymes [BR:
fcli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M3M38_00370 (truB)
Transfer RNA biogenesis [BR:
fcli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M3M38_00370 (truB)
Prokaryotic type
M3M38_00370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
USS86569
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All DBs
Position
69672..70583
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AA seq
303 aa
AA seq
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MINGIIPLYKPLGLTSFGCVSKIRGIVHQKKVGHSGTLDPNVDGVLPICLGNGTKVVDYL
MATGKTYRGAITLGFATTTEDLDGEIVAEQHDFKPLTDAQIKTGLTHFIGSHIQTPPMYS
AVKVNGRRLYDYARHGETVKRPQRTIRVTDFYQIGDSIVDWNAGTQTIFFEVDCGKGTYV
RTLAVDFGRYFGLPAVMSQLTRIASGGFDIQQTVALETLEDAQQAGQLDQFIYPIDHALH
AFAHVDLTAEQWMQVQHGSFLPASDLQTTEAEIVLRYNSSDKALYYYDESHQRYKPQKMF
SLE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacggaattatcccgttatataaaccattaggcctgactagttttggctgtgtc
agtaaaattcgggggattgtgcatcaaaaaaaggtgggccatagcggtaccctcgatcca
aacgtggatggagtgttaccaatttgtttaggcaatgggactaaggtggttgattatctg
atggccaccgggaagacctatcgaggagcgattaccctgggttttgcgacaaccactgaa
gatttggatggtgaaattgttgccgaacagcatgattttaagcccctgaccgatgcacaa
attaaaacgggattaacgcacttcattggttctcacattcagacgccacccatgtattcg
gcggttaaggtgaacggacgtcgcttgtatgattatgcccgtcatggcgaaaccgtcaaa
cggccgcaacgcacgattcgggtcactgatttctatcaaatcggagattccattgttgat
tggaatgctggaacccaaacgattttctttgaagtggattgtggcaaaggaacctacgtg
cggacgttagcggtcgactttggtcgctactttggcttacccgccgtgatgtcacaacta
actcggattgctagcggtggatttgatattcagcaaacggtcgctttagaaactctggag
gatgcgcaacaagccggacaattagatcagttcatttatccaattgaccatgcgcttcac
gcctttgcacacgttgatttgacggctgaacagtggatgcaggtccaacatgggtccttt
ttaccagcatcagacttgcagactactgaagcagaaatcgttttacgctataatagtagc
gataaggctttatactactatgatgaaagtcatcagcggtataaaccacaaaaaatgttt
agtttggagtaa
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