Fructilactobacillus cliffordii: M3M38_00645
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Entry
M3M38_00645 CDS
T08843
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fcli
Fructilactobacillus cliffordii
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcli03032
]
M3M38_00645
03036 Chromosome and associated proteins [BR:
fcli03036
]
M3M38_00645
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_00645
DNA replication proteins [BR:
fcli03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M3M38_00645
Chromosome and associated proteins [BR:
fcli03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M3M38_00645
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M3M38_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Baseplate_J
Rpf1_C
NA37
Ribosomal_S30AE
Motif
Other DBs
NCBI-ProteinID:
USS86624
LinkDB
All DBs
Position
127354..127629
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVDDVAQATGLTKKDATAAMDAVFDAIQAQLAKGERVQLIGFGSFEVRERAARK
GRNPQTGKEIEISASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaagcagaattggtagacgatgttgcgcaagcaactggtttaactaaaaag
gatgctacggcagcgatggacgctgtttttgatgcaatccaagcacaacttgcaaaaggt
gaacgtgttcaattaatcggttttggtagttttgaagttcgtgaacgtgctgcacgtaag
ggacggaacccccaaactggtaaggaaattgaaatctctgcaagtaaagtacctgccttt
aaacctggtaaagctttaaaggatgctgttaaataa
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integrated database retrieval system
