Fructilactobacillus cliffordii: M3M38_01345
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Entry
M3M38_01345 CDS
T08843
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M3M38_01345 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_01345 (mutM)
Enzymes [BR:
fcli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M3M38_01345 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M3M38_01345 (mutM)
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M3M38_01345 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
Zn-ribbon_8
TF_Zn_Ribbon
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
USS86753
LinkDB
All DBs
Position
complement(264272..265114)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETVRSGLTKLVQGATIESVEVLYPKMINLPAADFEKDLAGKQIIRIDRRGKYL
LFRLSDDLTLVSHLRMEGKYEVEPEGSPRPKHTNIVFHLNDGRELWYKDTRMFGKMALVK
DDEVMNLSGLNKIGPEPTDADLSFTYLKERLHKSHRKIKAFLLDQSQVAGLGNIYCDEVL
WMSKIHPEQMTNYVSDAEIETLRQNIIKEIAAAIQGHGTTVHSYSNAFGEAGEFQNQLQA
YGRKGEPCRRCGTPMEKIKVAQRGTTFCPKCQVVHGDLSD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtagaaaccgtccgttccggactaactaaattagtgcaaggt
gcaacaattgaatccgttgaagtattgtacccaaaaatgattaacctccctgctgctgac
tttgaaaaggatcttgcaggcaaacaaattattcggattgatcgccggggaaagtattta
ttatttcgacttagcgatgatttaaccctagtttcgcatttgcggatggaaggaaagtac
gaagttgaaccagaagggtcaccacgacctaaacataccaatatcgttttccatctcaac
gatggtcgcgagttgtggtacaaggatacccggatgtttggcaaaatggcgctcgtaaag
gatgacgaggtcatgaatttatcaggattaaataaaattgggccggaaccgaccgatgcg
gacttaagttttacgtatcttaaagaacgactgcataaatcacatcgtaaaatcaaggcg
tttttattagatcaatctcaagtagcgggtcttggaaacatttactgtgacgaggtacta
tggatgtctaaaattcatcccgaacagatgaccaactacgttagtgatgcggagattgaa
acgctccggcaaaacattattaaagaaattgccgctgccattcagggacatggaaccacg
gtgcactcgtattccaatgcctttggggaagctggcgaatttcaaaatcaactgcaagct
tacggtcgaaaaggtgaaccgtgccgtcggtgtggaacacccatggaaaaaattaaagtg
gctcaacggggaacgaccttctgtccgaaatgccaagtggttcacggtgatttaagtgac
tag
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