Fructilactobacillus cliffordii: M3M38_01350
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Entry
M3M38_01350 CDS
T08843
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03030
DNA replication
fcli03410
Base excision repair
fcli03420
Nucleotide excision repair
fcli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M3M38_01350 (polA)
03410 Base excision repair
M3M38_01350 (polA)
03420 Nucleotide excision repair
M3M38_01350 (polA)
03440 Homologous recombination
M3M38_01350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcli03032
]
M3M38_01350 (polA)
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_01350 (polA)
Enzymes [BR:
fcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M3M38_01350 (polA)
DNA replication proteins [BR:
fcli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M3M38_01350 (polA)
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M3M38_01350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M3M38_01350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
USS86754
LinkDB
All DBs
Position
complement(265134..267821)
Genome browser
AA seq
895 aa
AA seq
DB search
MGAKKILLIDGNSLFYKAFFALYQSLDRFTNQEGLHTNALYGFNRMLNDMLARVQPDAVL
AAFDAGQTTFRTKMYDEYKGGRDKMPEELREQFPYVMDLLKDRGIKTYELDNFEADDIIG
TTAKQAEAVGYEVTVVTGDRDLTQLCSEQTTVKVSKKGVSDIEAYTPEYVEATMGIKPAQ
IVDVKGLQGDTSDNYPGVEKVGPKTALKLVKQFGTIDNLYQHLDEVSGKKLKEHLVQDQK
QAFLSKELATIKRDAPLTVELADMKYLGDQEPALQDFYQKMNFRSFLTEAGTEKTLTTEL
PEVEYTILTAENAVELDQFTTEITINVEMLTANYHVADQVGLVLGTPDHWYVTNDIDLVE
NEHVKRLLESTTVKKNVFDNKAQRVALQRDGVRLQNVGFDMLLVSYLLNTLNNADDVGEV
ARQHDYHGVLPDQDVYGKGKSLKLPELPAFYVHLVRKALAISSLKDQMLTGLTEHQQSNL
YREMELPLSEVLAQMEITGIKVDPERLDELKSKFQERVSELQQGIYQDAGQEFNIGSPKQ
LGEILFEKLKLPVIKKTKTGYSTSVDVLEKLAPEHPIIEKILAYRQLTKLISTYIDGIKS
DILSDQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRTEEGRKIREAFVPSHPDWVLFSSDY
SQIELRVLAAISGDQNMKAAFASDEDIHAVTARRIFELGETATVDANLRRQAKAVNFGIV
YGISSYGLAHNTGISNPDAKRFIDKYFHEYPGVKEYMDGSVAFAKQHGYVETISKRRRYI
PEIKSRSFHQRQFAERIAMNSPIQGSAADIIKAAMIRMNHVLATEGLQARMLLQIHDELI
LEAPQTEVATLTKIVPEVMDSIMQTDPLLQKAAVNFDVPLKVESHSGDNWYNIKK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaaaaagatactattgattgatggcaattccttattttataaggcatttttt
gctctctatcaatcgttagaccggtttactaatcaagaagggttgcataccaatgccttg
tatgggtttaaccggatgttaaatgatatgttagctcgggtgcaacctgatgcagtctta
gcggcgtttgatgccggtcaaactacctttcggacaaaaatgtatgacgagtacaagggt
ggccgtgataaaatgccggaagaactacgggaacaatttccgtatgtgatggatctactg
aaggatcgggggattaagacctacgaactcgataactttgaagctgatgatatcattgga
acgaccgccaagcaggccgaagcagtcggatatgaagtgacggtcgtgacgggtgatcgg
gatttaacccaactttgttcggaacaaaccacagtgaaagtttcgaaaaagggggttagt
gatattgaagcttacacccctgaatacgtggaagcaacgatgggaattaagcccgctcaa
atcgtggatgtgaagggtttacaaggcgatacctcagataattatccgggggtagaaaag
gtcggtcccaaaaccgcgctcaaattagttaagcagtttgggacgattgataatctgtat
cagcatctggatgaagtttccgggaaaaagttgaaggaacatctggtgcaagatcaaaaa
caggcctttttatccaaagaattggcaaccatcaagcgtgatgcgcctctcacggtggaa
ttagccgacatgaaatatttgggtgatcaagaaccagcattgcaagatttttaccaaaaa
atgaactttcgcagtttcttaacggaagctggaacagaaaaaacattaactacagaactg
ccggaggtagaatacacgattttgactgctgaaaatgcagtggaattagatcagtttact
accgaaattacaattaacgtggaaatgttgacggctaattatcacgtggcggatcaagtc
ggcttggtactagggactccagatcactggtacgtaacaaatgacattgacttagtggaa
aatgagcacgttaaacgattgttagagagtaccactgtcaaaaagaacgtttttgataat
aaagcgcaacgtgtcgctttgcagcgggatggagttcggttacaaaacgttggttttgat
atgttgctggtctcgtatctgttaaataccttgaataacgctgatgatgtgggcgaggtg
gcccggcaacacgattatcatggagttttgccagatcaagatgtctatgggaaagggaaa
agtctcaagttaccggaattacccgcattttatgtccatttggtgcgcaaagcgttagcg
attagttcgttaaaggaccaaatgttaacggggctaacggaacaccaacagtccaattta
taccgagaaatggagctaccgttatcggaagtactagcgcagatggaaattaccggaatt
aaggttgatccagaacgtctagatgagttaaagagtaagtttcaagaacgagtttctgag
ttacagcagggcatttaccaggacgccggtcaggaatttaacattggatctccgaaacaa
ctgggagaaattctctttgaaaaactcaagctcccggtaattaaaaagaccaagaccggt
tattcaacctcggtcgacgtgttagaaaaattagctcctgaacatcccatcatcgaaaag
attttagcctaccgacagttaaccaagttaatttcaacctatattgatgggattaagagc
gatatccttagtgatcaaaaggtgcacactcgttacctgcaaacattaacccagacggga
cggttgtcttccgttgatccgaacttacaaaacattccggtacggacggaagaaggacgt
aaaattcgcgaagcctttgttccatcccatccagactgggttctattctcttcagattac
tcccaaatcgaattgcgggtgttggctgccatttccggcgaccagaacatgaaagcagcc
tttgctagtgatgaagatatccatgcggtcactgcccgccgcatttttgaactaggagaa
acggcgaccgtagatgcaaacctaagacggcaggccaaagcggttaactttgggattgtg
tatggaattagttcgtacggattggcgcacaacaccggaatttctaatccagatgccaaa
cgctttatcgataagtactttcatgaatatccgggagtaaaggaatacatggatgggagc
gtggcatttgctaaacaacatggatatgttgaaacgatttcgaaacgccggcgttacatc
ccggaaattaaatcccgaagttttcaccaacgtcagtttgcggaacgaatcgccatgaat
tccccgattcaggggagtgcggctgatatcattaaagctgccatgattcgcatgaatcac
gtgttggcaacggaaggattacaggcgcggatgttgttgcaaattcatgatgagctaatt
ttggaagcgccccaaacagaagtggcaacgttaactaaaattgtgccggaggtcatggat
tcgattatgcaaacggatccgttactccaaaaagcggccgttaatttcgacgttccgtta
aaagttgagagtcattccggtgacaattggtataatataaaaaaataa
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