Fructilactobacillus cliffordii: M3M38_02405
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Entry
M3M38_02405 CDS
T08843
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03030
DNA replication
fcli03430
Mismatch repair
fcli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M3M38_02405
03430 Mismatch repair
M3M38_02405
03440 Homologous recombination
M3M38_02405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcli03032
]
M3M38_02405
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_02405
Enzymes [BR:
fcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M3M38_02405
DNA replication proteins [BR:
fcli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M3M38_02405
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M3M38_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
DUF4209
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
USS86937
LinkDB
All DBs
Position
473058..473591
Genome browser
AA seq
177 aa
AA seq
DB search
MNFVAIDFETATHQRASACSVALTVVRNDQVVDEFYSLINPETSFNWRNIQVHGIHQRDV
QTAPTFPAIWEIIKPFFKPHRLVIAHNNRFDNSVLKKSLERYELPVPHYQTLDTVKTAKK
FYPEFPNHKLNTVSERLGITLEHHHNALDDSLACANILLAQQQQFGPAALRPFITNI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttgtcgccattgattttgaaaccgcaacgcatcagcgcgctagtgcgtgctcc
gtggccctgacggtcgtgcgtaacgaccaggtggttgacgaattttattcgttaatcaac
cccgaaacgtcctttaactggcgcaacatccaggtccatgggattcaccaacgcgacgtc
caaacggcgccaacgtttccagcaatttgggaaatcatcaaaccatttttcaaaccccac
cgcttggtaattgcccacaacaaccgcttcgataacagcgtcttaaaaaagagtttagaa
cgctacgagctcccggtccctcactatcaaaccctggatacggttaaaaccgcgaaaaag
ttctatccggagtttccgaaccacaagcttaacacggtcagtgagcgactgggaattacg
ttggaacatcaccacaacgccttggatgacagtttagcgtgtgccaacattttgctcgcc
caacagcaacaattcggtccggcagcgctgcgaccttttattaccaacatttaa
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