Fructilactobacillus cliffordii: M3M38_02425
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Entry
M3M38_02425 CDS
T08843
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M3M38_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_02425
Enzymes [BR:
fcli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M3M38_02425
DNA repair and recombination proteins [BR:
fcli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M3M38_02425
Prokaryotic type
M3M38_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
USS86941
LinkDB
All DBs
Position
complement(475589..476281)
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AA seq
230 aa
AA seq
DB search
MKRFIDNDWWPILEPEFQKPYYQKLRQFLVNEYRNQTIYPAMQRIFQAFEWTPFSDTKVV
ILGQDPYHGPHQAIGLSFAVEPNVTLPPSLRNIYKELDNDLGIKPVHHGYLKHWADQGVL
LLNSVLTVRDGQAYSHQGHGWEQLTDYAIAKLSERPEPVVFILWGRSARNKLKLIDQETN
VVIQSAHPSPLSANRGFFGSRPFSKTNAALTAMGETPIDWQLPEHVTMTN
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatttattgataatgactggtggcccattttagagccggagtttcaaaagcct
tactaccaaaagttacggcagtttttggtcaatgaataccggaatcagaccatttatccg
gccatgcagcggatctttcaagcctttgaatggacaccgttttcagacaccaaagtggtc
atcttagggcaggatccgtaccatggtccgcaccaggcaattgggttaagctttgcggtg
gagcccaacgttacgttgcctccgtcgttgcgcaacatctacaaggagttggacaacgat
ttggggattaagcccgtgcaccacggttatttaaagcactgggcggaccaaggtgtacta
ctcttgaactccgttttgaccgttcgtgatggccaggcgtattcgcaccagggtcatggt
tgggaacaactaacggactatgcgattgccaagttgtcggaacggccggagcccgttgtt
ttcattctctggggtcggtcagcgcgtaacaagcttaagctcattgaccaggaaaccaac
gttgtgattcaatctgcccatcccagtccgctgtctgctaatcgaggtttcttcgggtca
cgaccgttttcaaaaaccaacgcggccctaaccgcaatgggagaaactccgattgactgg
caattgccagaacacgttacgatgacaaattag
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