Fructilactobacillus cliffordii: M3M38_04570
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Entry
M3M38_04570 CDS
T08843
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
fcli
Fructilactobacillus cliffordii
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_04570
Enzymes [BR:
fcli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M38_04570
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M3M38_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
USS85983
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All DBs
Position
915038..918580
Genome browser
AA seq
1180 aa
AA seq
DB search
MSLQFILGKASADHAGQVIQAMQTSAAQHPSDQYFQIVPNNVKFEAELGTLKRLNLEEQA
TYAQNQIQTFSFSRLIWYFLRDHPAYQVPQLSQVAINMIIFQIVTDHEADLTIYRGEGKQ
AGFIQQVAEQLMELQQGNVSPDDLQQLQQTATGELRNKLHDLAIIYQAFLAATDGKYLYK
AATLELLNEYLLQMPAAQLEQFHFYFTGFSELTAQELQLVHTLIRRAHVVIDLTLDQSVR
EAAPAPEAFFAQPGRLYYRLYQYAQAHSRILPDQYAPTRDLQPGLQQLEEYWINSSELDR
KLPAAPQSNPAVHVLQAATPFDELMHVSTKIRQLVATGKYRYGDFLVVARNLSDYENIIN
PIFSMQQIPYFTDIQKQMENHPLVVLLQALFAIYKPNRARNYRYEDVMKLLKTELLIPKQ
TEKLADFRWQLALCENLVLKNGYYGKKWTQQEDWKYTTVVDETTGVVVDKNQAFSKAINQ
IRHFVKDNLPPFYRRLAKAKTGREAAQILYQFLVNHGVPARLQEWQRQATEAGNLQEAGQ
AEQVWNEFCHILDDYVNVLGDQEFVQDDFLALLQAGFVGATYSQIPSTLDQVTISEMGRY
HLRDKRITIVVGADDHSLPVRIERQSLLSDGDRDQLSEQLATDQFLATTSETQMVAEPYE
DYLTFLTPRDHLYFSHHAGNGTDDTLLKQSPYVHRIQEFFQLTPEVFHAQPDANELDVQP
YLGSPRATLKYLIPAELASRKQHQKLNASWSAVRTTLEQDANPQLQRLTSNLMSSLDYRN
EPKPLTDEIVTGLYGNQILTSISKLEEFYSNPYEYFLEYGLRLKERDEFEINPADTGTFY
HEALDHLMKLVNQQQLELGDLDDQQVTELVTEVTTKLIEEDQAQRYEILQSSERMNYIKS
QLIKTVTEMAQALRNQARHVHMRPRQTEVAFGPGKHYQELKFALDNHKQVSVQGRIDRID
GMDVNGTDYLNIVDYKSSEREIKFAQVYDGTAMQMMTYMDAVLKNLKSIGDTEQARLIGA
LYLHVFDPVLDYTELKNWQDPQQIQQRLLQKHKYNGILLADKDVLQSLGDQDVSAVYPFR
FKNDGDFYKDSKIISQADLDRVINHTEQLIQTAGNRIFAGDTRLWPARFQDRSNITNSAY
QAVMQFDPLLAENNYREVENLSMAEVLEKLRAEQKGGNHE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacagtttattctgggaaaggcaagtgcggatcacgctgggcaagtaattcaa
gcgatgcaaacgtctgccgcacagcatcccagcgatcagtattttcaaattgtccccaat
aacgttaaattcgaagcagaattggggacgctgaaacgattaaacttggaagaacaagcg
acctacgcccaaaatcaaattcaaacgttctcgttttcgcgactgatttggtactttttg
cgtgatcacccggcttatcaggtcccccagttatcccaggttgccattaatatgattatt
tttcaaattgtcaccgaccacgaagccgatttaaccatctaccggggtgaaggcaaacaa
gccggttttattcaacaggtggccgaacaactgatggagttgcagcaggggaacgttagt
cccgatgacttacagcagctgcaacagactgcgaccggcgaattacgtaataagctccac
gatttagctatcatttatcaggcttttttagccgcgaccgacggaaaatatttgtataaa
gcggcgacgctggaactactgaacgagtaccttttgcagatgcccgctgctcaattagag
cagttccacttttactttaccggttttagtgagttgaccgcacaggaactgcagttagtt
cacactttgattcgcagggcgcacgtggtgatcgatttgacgttggatcaatccgtccgc
gaggcggctcccgcgcccgaagcgttctttgcgcaaccaggccggctttattaccggtta
taccaatatgcgcaagcacacagccggattttacccgatcaatatgcccccacgcgggat
ttacagcccggtttacaacagttagaagagtactggattaacagtagcgagttagaccgg
aagctgccagcggcaccgcaatccaatccagcggtgcacgtgttacaggccgcaacgccc
tttgatgagttaatgcacgtttcgactaagattcgccaattagtcgccaccgggaagtac
cggtacggggatttcttggtggtagcgcggaatttgagtgattacgaaaacatcattaat
ccgattttttcgatgcagcaaatcccgtactttacggatattcagaagcagatggaaaat
catccgttggtggtgctgttacaggcgctctttgcgatttacaagcccaaccgcgcccgc
aactaccgttatgaagacgtcatgaagctcttgaaaacggagctgttgattcccaaacaa
actgaaaaactagcggattttcgctggcaattggccttgtgtgaaaacttagtcttgaaa
aacggctactacggcaaaaaatggacgcagcaagaagactggaagtacacgaccgtcgtg
gatgaaaccacgggcgtggtcgtagacaagaatcaggcgttttcaaaggccatcaatcag
attcgtcactttgtgaaggataatttaccgccgttctaccgccggctggctaaagccaaa
accggtcgggaagcggcgcaaatcctgtaccagtttttggtgaaccatggagtccccgcc
cgtttgcaagaatggcaacgacaggcgaccgaagccggaaaccttcaggaagcggggcag
gccgagcaggtatggaacgaattttgtcacattctagacgactacgttaacgtattaggt
gaccaggaattcgtgcaggatgacttcttagcccttttacaagctggttttgtaggcgcc
acctattcccagattccgtcgacgttagatcaggttacgatttcagaaatgggacggtac
catctccgcgataagcgaatcacaatcgtggtcggcgctgatgaccacagcttaccggtt
cgaattgaacgtcagagtcttctgagtgatggggatcgagatcaactgagtgagcagtta
gccacggaccagtttttagcgactaccagcgaaacgcaaatggtggcggaaccatacgag
gactacttgacctttttgacgccgcgggatcatttgtacttttcccaccacgcgggcaat
gggaccgatgatacgttattgaagcaatctccctacgtgcatcggattcaggaatttttc
cagctgacgcccgaggtatttcacgcccaaccggatgcgaacgaactggacgtgcagccg
tatctagggtcgccccgggccacgctgaagtacttaattccagccgagctagctagtcgg
aagcagcatcaaaagttaaacgctagttggtcggcagttcggactacgttagagcaggat
gctaatccgcaactgcaacgattgacaagcaatctgatgagcagcttggattatcgcaac
gaaccgaagccattaaccgatgagattgtgacgggtctatatgggaaccaaattctaact
tcgatttccaaattggaagagttttattccaatccgtacgaatactttttggagtacggt
ttgcgactcaaagaacgggatgaatttgagattaatccagccgatacggggaccttctat
catgaagcgctcgaccacctgatgaaactggtgaaccagcaacaactggaactaggggat
ttagatgatcaacaggttacagagttggttacggaagttaccacaaaactgattgaggaa
gatcaggcgcaacgctacgagattttgcaaagttcggagcggatgaactacattaagagt
cagttgattaagacagtgactgagatggcgcaggccttgcggaatcaagcccggcatgtg
cacatgcggccccgccaaaccgaggtcgcctttggcccaggtaaacactaccaggagctg
aaatttgctttagataatcacaaacaagttagtgtgcaggggcggattgaccgaattgat
ggcatggacgtcaatgggacggactaccttaacatcgtggactacaaatcaagtgagcgt
gagattaaatttgcccaggtctacgacggaactgccatgcagatgatgacgtacatggat
gccgtgttaaagaacttgaagtccatcggagacacggagcaggcgcgcttgattggtgct
ttgtacctgcacgtttttgatccagtgctggattacacggagctgaaaaactggcaggat
ccgcaacaaattcagcaacgtttgttacaaaagcacaagtacaatgggattttattggcg
gataaagacgtcttgcaatcgctaggtgatcaggacgtgagcgctgtctatccgtttaga
tttaagaatgatggagatttctataaggatagcaaaatcatttcacaagccgatttagat
cgggtaatcaatcacacggaacagttgattcaaacagccgggaaccgtatttttgcgggc
gatacccggttgtggccagctcggttccaggacaggtccaacatcacaaattctgcctat
caagccgtgatgcagtttgacccgttattggcggagaacaactatcgtgaggtagagaac
ctcagcatggcggaagtcctagaaaagttacgagcagaacagaaaggaggcaatcatgag
tga
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