Fructilactobacillus cliffordii: M3M38_05820
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Entry
M3M38_05820 CDS
T08843
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03420
Nucleotide excision repair
fcli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M3M38_05820
03430 Mismatch repair
M3M38_05820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_05820
Enzymes [BR:
fcli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M38_05820
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M3M38_05820
MMR (mismatch excision repair)
Other MMR factors
M3M38_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
AAA_30
AAA_16
NACHT
zf-C2H2_aberr
Motif
Other DBs
NCBI-ProteinID:
USS86212
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All DBs
Position
1186139..1188454
Genome browser
AA seq
771 aa
AA seq
DB search
MATEDTKIKQAEQAHLDYVRGKIKIAEETTAETITKAKQSQKDLEDHFYDDVRLKTSTYE
GQMETGVSVRQQQQMLEQRQNRWQSATRDMETLQKLDQNAYFARIDLKEEGEAQPEKIYI
GLSSFVNPNDSDEYLIYDWRAPISSVYYDSGVGEMTYNAPSGPQRVDVTLKRELQIKNGK
LTQVFDTDEAVGDRVLLENLQHQSDTKMKSIVTTIQKEQNAIIRDTSSDLLFVQGVAGSG
KTAAVLQRVAYLLYRYRGNLTPGQVILFSPNQLFNDYINQVLPELGEQNMVQMTYYQFMR
RRVPRLTVETLEQRFDESLTDETQNVTTLKNSLTLFAAEGKYADSLNQTGAAFRNIMFQG
KVFISKEQINEIYCSFNPNYRLRNRLEATKEKLLQILKQRMGMEMKKRWVEEAVEGLSSE
QIEMLHANAGRQRTDDDRDARFLARQVVKAAFAKVHQQIKRNRFFNINQQFVNFLRQVPE
LVNLSDWHVTLSEWQTSVRATVKRFQNGKISIADVSIYLYLFDLVTGKRPDLKMRYLFID
EVQDYTPFQLAYLQWNYPRAKFTVLGDLNQAIFTRDSSQTLMADLRQLFNPDKIRVIKLL
KSYRSTAQITDFTKQLIPDGQDIEAYARQGEIPVLAITKNHEQAVQRLVQTITTNQKAEE
TTAVIGKTLAECRQIAADLKDRGVSATLIQTENQRLAKGVVIVPAYLAKGLEFDAVVMWD
GSKDSYPTDQDDKLVYTICTRAMHRLEIISIGEPSPLFAAVNPTDYQLVKE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagaagacaccaagattaaacaagcagaacaagcccacctcgactacgtgcgg
ggcaagattaaaattgcagaagaaacaacggccgaaacgattacgaaggccaagcagagt
caaaaggatttagaggatcatttctatgatgatgttcgcttaaagaccagtacttacgaa
ggccaaatggaaaccggagtctccgtccggcagcaacaacaaatgttggaacaacggcaa
aaccggtggcagtcggcaacgcgggacatggagacgttgcaaaagttagaccaaaacgcc
tactttgcccggattgacctgaaggaagagggtgaagcacagcccgaaaagatttacatt
gggttgtcttcctttgtcaatccgaatgatagcgacgagtaccttatttacgactggcga
gcccccattagtagcgtgtactacgacagtggtgtcggagaaatgacttacaatgcaccg
agcggtccacaacgggtggatgtcaccttaaaacgcgagctccagattaagaatggcaag
ctgacccaggtttttgataccgacgaagcggttggcgaccgggtgttactggaaaactta
caacaccagtcagacactaagatgaagagcatcgtaaccacgattcaaaaggaacagaac
gcgattatccgggacaccagttcggatctcctgtttgtgcaaggggtcgctggatccggg
aaaacggcggcagttctgcaacgggtggcctacctgttgtaccggtaccggggcaatcta
acgccgggtcaggtaattcttttttcgccgaaccaactctttaacgactatatcaaccag
gtgctgcctgaattaggcgaacaaaacatggtgcagatgacctactaccagtttatgcgg
cgacgggtgccccgactcacggtggagactttggaacaacgttttgacgaaagcttgact
gacgaaacccaaaacgtgacgacgttgaaaaatagtctgaccttgtttgcagccgaaggg
aagtatgcagattccttaaaccaaacgggagcggcctttcggaacatcatgtttcaaggc
aaggtctttatttctaaggaacaaattaatgaaatttattgcagttttaacccaaattac
cggctgcgaaatcgattagaggctactaaggaaaagctgctgcagattttgaagcaacgg
atgggcatggaaatgaagaaacgctgggtggaagaagccgtggaaggactcagtagcgag
cagattgagatgctacacgccaacgctggtcggcaacggacggatgacgatcgtgatgct
cgcttcttagcgcgccaggtggtcaaggcggcttttgccaaggttcaccaacagattaaa
cggaatcggttctttaatattaaccagcagttcgttaactttttgcgtcaggttccggaa
ctggtcaacctgtccgattggcacgtaacgttgtccgaatggcagaccagcgtccgtgcc
acggtgaaacgattccaaaatggcaaaatcagcattgcggacgtttccatctacctctac
ttgtttgacctggtaacggggaagcggccggacctcaagatgcgctacctctttattgat
gaagtgcaggattacacgccgtttcaactagcctacttgcagtggaactacccgcgggca
aagtttacggtcctgggggatttaaaccaggccatctttacccgagacagcagtcaaacg
ttgatggcagacttgcggcagctctttaatcccgacaagattcgggttatcaagctattg
aagtcctaccgatcaacggcccagattacggactttaccaagcaattaattcccgatggt
caagacatcgaagcctacgcgcgtcagggtgagataccggtgcttgccataactaagaac
cacgagcaagcggtccagagattagtccaaacgattactaccaatcaaaaggctgaagaa
accaccgcggtgattggcaagacgctcgctgaatgtcgccaaattgctgctgatttaaag
gaccgtggggtctccgcgacgctgattcaaacggaaaatcaacgtctggcgaagggggtt
gtgattgttccagcctacctcgccaaggggcttgaatttgatgccgtggtgatgtgggac
ggttccaaggatagctatccgacagatcaggatgacaagctggtttacaccatttgtacc
cgggccatgcaccgcttggaaatcatctccatcggcgagccgtcacccctctttgcagcg
gtgaacccgaccgattaccaattggtaaaggagtaa
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