Fructilactobacillus cliffordii: M3M38_06250
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Entry
M3M38_06250 CDS
T08843
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M3M38_06250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcli03021
]
M3M38_06250
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_06250
Enzymes [BR:
fcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M3M38_06250
Transcription machinery [BR:
fcli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M3M38_06250
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M3M38_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4249
Ig_GpJ_C
SAM_EPH
DUF211
Motif
Other DBs
NCBI-ProteinID:
USS86286
LinkDB
All DBs
Position
1259962..1260918
Genome browser
AA seq
318 aa
AA seq
DB search
MIEFEKPNIHKIEETNNYGEVVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSVQIDGVL
HEFSTVKGVTEDVTKIILNLKKLKLKIDGDDDQNETHTMSINVTGPADVTGADLVTDSDT
TVLNPDLHIATVAEGATLHMTVTANKGRGYVSAEENKARNDDMPIGVLPVDSIYTPIERV
NYQVEDTRVGQRDDFDKLTLDVWTNGSITPSEAISLAAKVLSQHLEMFVDLTDKAQQANV
MVEKEESHKEKMLEMSIEELDLSVRSYNCLKRAGINTVQELTDKSMADMMKVRNLGRKSL
EEIEQKLEALGLSFRKED
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaagccaaacattcataaaattgaagaaacaaataactatggtgaa
gtagttgtagaaccattagaacgtggttatggaacaaccttagggaactcgttacggcgg
gttttgctagcttctttaccaggcgctgcagttaccagtgttcaaattgatggtgtttta
cacgaattttcaactgttaaaggtgtcacagaagatgtgaccaagatcattttgaacttg
aaaaagttgaagttgaaaatcgatggtgacgacgatcagaacgaaactcacacgatgagt
atcaacgtaactggtccggccgatgtaaccggagctgatttggtaactgatagtgataca
acggttctaaatcctgatttacacatcgcaacggttgctgaaggtgccaccttacacatg
acggtcacggccaacaagggtcgcggttatgtctcagctgaagaaaacaaggctagaaat
gacgatatgcccattggtgtgctaccagtcgattctatctataccccaatcgaacgtgtt
aactatcaagttgaagacacgcgtgttggacagcgtgatgacttcgataaattgactctc
gatgtttggactaatggttcaattactccttctgaagcgattagtttagctgccaaggtg
ttatcacaacacttggaaatgtttgtggacttgaccgacaaggcccaacaagctaacgtc
atggtggaaaaagaagaaagccataaagaaaaaatgctcgaaatgtcaattgaagaactg
gatctttccgttcgttcttacaattgtttgaaacgggctggaattaataccgtccaagaa
ttaactgataaatctatggctgatatgatgaaagttcgtaacttgggacgtaagtcactc
gaagaaatcgaacagaaattagaagcacttggattatcatttcggaaagaagactaa
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